Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas simiae WCS417

Subject, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) from Variovorax sp. SCN45

 Score =  514 bits (1325), Expect = e-150
 Identities = 267/466 (57%), Positives = 326/466 (69%), Gaps = 21/466 (4%)

Query: 1   MHIHILGICGTFMGSMAVLAKELGHHVTGSDANVYPPMSTQLEAQGIELTQGYDPSQFDP 60
           MHIHILGICGTFMG +A LA+E GH VTG DA VYPPMS QL + GI+L +G+   Q   
Sbjct: 1   MHIHILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFGAEQLKL 60

Query: 61  VPDLVVIGNAMSRGN--------PAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTH 112
            PD+ VIGN +SR          P +E +L+ G PY SGPQWLA+HVLQGR VLAVAGTH
Sbjct: 61  SPDMFVIGNVVSRARLPDGSPKFPLMEAILDAGKPYTSGPQWLAEHVLQGRHVLAVAGTH 120

Query: 113 GKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVIEADEYDSAFFDKRSK 172
           GKTTT+SMLAWVLE  G +PGFL+GGVP +F VSARLGD   FVIEADEYD+AFFDKRSK
Sbjct: 121 GKTTTTSMLAWVLEKGGKAPGFLVGGVPLDFGVSARLGDGTAFVIEADEYDTAFFDKRSK 180

Query: 173 FVHYRPRTAILNNLEFDHADIFPDLAAIERQFHHLVRTIPSEGLVIHPTTEPALQRVIEM 232
           FVHYRPRTA+LNNLEFDHADIF DLAAIERQFHHLVRT+PS G ++   TE +L+ V+  
Sbjct: 181 FVHYRPRTAVLNNLEFDHADIFDDLAAIERQFHHLVRTVPSTGRLVVNATEESLRHVLSQ 240

Query: 233 GCWTPVQTTGAGGQWQVKLLSDDGSTFEVLFEGQTQGIVEWDMTGQHNVANALVTLAAAR 292
           GCW+ +   GAGG+WQ +   D    F+VL +G+  G VEW+++G HN  NAL  +AAA 
Sbjct: 241 GCWSELARFGAGGEWQARGSHD---AFDVLRQGEVIGRVEWELSGLHNQMNALAAIAAAD 297

Query: 293 HVGVVPSMGIAALSAFKSVKRRMEKVADV----NGVTIYDDFAHHPTAIATTLDGLRKRV 348
           HVGV P+    AL +F++V+RRME    V      +T+YDDFAHHPTAI TTLDGLR ++
Sbjct: 298 HVGVPPAEAARALGSFRNVRRRMELRGTVERSGGSITVYDDFAHHPTAIRTTLDGLRNKL 357

Query: 349 GDA-----PIIAIVEPRSNSMKLGAHRDGLPESVNDADQVVWYAPANLGWDLPAIAALCT 403
             A      I+A  EPRSN+MKLG     LP S+  AD + +   A L WD+ A  A   
Sbjct: 358 DAAGKKSERILAAFEPRSNTMKLGVMAAQLPWSLEAAD-LSFCHTAGLDWDVAAALAPMG 416

Query: 404 VPSLVCDSIEGIIEHVKRLAKPGTHVVVMSNGGFGGLHGKLAEALK 449
             + +  +IE ++  +   A+PG H+V MSNGGFGG+H KL  ALK
Sbjct: 417 ERAQLAGAIEPLVNQIVAAARPGDHIVCMSNGGFGGVHDKLLAALK 462