Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas simiae WCS417

Subject, 482 a.a., UDP-N-acetylmuramate--L-alanine ligase from Pseudomonas putida KT2440

 Score =  164 bits (416), Expect = 4e-45
 Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 20/370 (5%)

Query: 3   IHILGICGTFMGSMAVLAKELGHHVTGSDANVYPPMSTQLEAQGIELTQGYDPSQFDPVP 62
           IH +GI G  M  +A +   LG+ V+GSD     P++ +LE+ G E+  G+  ++     
Sbjct: 19  IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKA-SPVTERLESFGAEIFVGHR-AENAATA 76

Query: 63  DLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSMLA 122
           D++V+ +A++  NP V   L + +P V   + LA+ +++ R  +AVAGTHGKTTT+S+LA
Sbjct: 77  DVLVVSSAINPANPEVATALERRIPVVPRAEMLAE-LMRYRHGVAVAGTHGKTTTTSLLA 135

Query: 123 WVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVIEADEYDSAFFDKRSKFVHYRPRTAI 182
            V    G+ P F+IGG       +A+LG + + + EADE D++       F+H +P  A+
Sbjct: 136 SVFAAGGLDPTFVIGGRLTAAGTNAQLGTSRYLIAEADESDAS-------FLHLQPMVAV 188

Query: 183 LNNLEFDHADIFP-DLAAIERQFHHLVRTIPSEGLVIHPTTEPALQRVIEMGCWTPVQTT 241
           + N++ DH   +  D   +++ F   +  +P  GL +    +P ++ ++      P  T 
Sbjct: 189 VTNIDADHMATYEGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQ-VKRPTVTY 247

Query: 242 GAGGQWQVKLLS--DDG--STFEVLFEGQTQGIVEWDMTGQHNVANALVTLAAARHVGVV 297
           G   +  ++ ++    G  + F VL   +    V  +M G HNV NAL T+A A   G+ 
Sbjct: 248 GFSEEADIRAINVRQQGMQTHFTVLRRDREPLEVSVNMPGNHNVLNALATIAIATDEGIT 307

Query: 298 PSMGIAALSAFKSVKRRMEKVADV----NGVTIYDDFAHHPTAIATTLDGLRKRVGDAPI 353
               +  LS F+ V RR +   ++      V + DD+ HHPT +A  +  +R       +
Sbjct: 308 DEAIVQGLSGFQGVGRRFQVYGELPVEGGSVMLVDDYGHHPTEVAAVIKAVRGGWPSRRL 367

Query: 354 IAIVEPRSNS 363
           + + +P   S
Sbjct: 368 VIVYQPHRYS 377