Pairwise Alignments

Query, 632 a.a., penicillin-binding protein 2 from Pseudomonas simiae WCS417

Subject, 636 a.a., peptidoglycan DD-transpeptidase MrdA from Dickeya dianthicola ME23

 Score =  518 bits (1333), Expect = e-151
 Identities = 271/628 (43%), Positives = 388/628 (61%), Gaps = 19/628 (3%)

Query: 8   KDHEKDARLVRSRVVFGAIMVVALLGVLIARLYFLQVIQYDYHSTLSENNRVHVQPIPPT 67
           +D+  +A L   R +   + ++ L G+L+A LY LQV+++D + T S  NR+ + PI P+
Sbjct: 9   RDYTAEAALFVRRALVAFLGILLLSGILVANLYHLQVLRFDDYRTRSNENRIKLVPIAPS 68

Query: 68  RGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQILDVIVEVLQLTPEDRAIFEKRMKQGR 127
           RG+I+DRNG  +A NR  + L +  E+  + ++ L  +  ++ LT ED   F K  K+ R
Sbjct: 69  RGIIYDRNGTPLALNRTIYQLELIPEKVNNLEETLQALKSIIDLTDEDIDNFRKERKRSR 128

Query: 128 RPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYMGRINEKE 187
           R F  +P+   L E Q+A  AVNQ+R PGVEV     R+YP G    H +GY+ +IN+K+
Sbjct: 129 R-FTSIPVKTGLNEVQVASFAVNQYRFPGVEVKGYQRRYYPYGAALTHVIGYVSKINDKD 187

Query: 188 LKTLDP----VNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTDPVP 243
           L+ LD      +Y+ TH IGK GIER+YE  LHG+ GYEEVE N RGRV+R L    P  
Sbjct: 188 LERLDQEGELADYAATHDIGKLGIERYYEDVLHGKPGYEEVEVNNRGRVIRQLHEQPPQA 247

Query: 244 GKDIVLSLDIKLQEAAEMALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISFKAY 303
           GKDI L+LD+ LQ   E  L G R AVV  DPK   +LAMVS PS+DPNLFV GIS K Y
Sbjct: 248 GKDITLTLDLNLQLYIEKLLAGSRAAVVVTDPKDASILAMVSTPSYDPNLFVDGISSKTY 307

Query: 304 AELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASSRVFDPGYYMLPNYDHK 363
             L +  +RPL NR  +G+YPP ST+KP +A++ L AGV+T  + +FDPG++ LP  + +
Sbjct: 308 HALLNDPNRPLINRATQGVYPPASTVKPYIAVSALSAGVITPYTSLFDPGWWQLPGSEKR 367

Query: 364 YRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFGLGQKVSLDMF--EE 421
           +R+W + G G ++L  ++  S DT+FY +++ +GIDRLS +M KFG G +  +D+   EE
Sbjct: 368 FRDWKKWGHGRLNLTKSLEESADTFFYQVSYDMGIDRLSEWMSKFGYGHRTGIDLSDKEE 427

Query: 422 SPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGIWNRPH-L 480
           SPG+MP+REWK    ++ W+ G+T+ +GIGQGY  ATP+Q+ +A   + N G    PH L
Sbjct: 428 SPGIMPTREWKMKRYKKPWYQGDTIPVGIGQGYWTATPIQMLKALTTLINDGQVKAPHLL 487

Query: 481 AKTIEGEKPV-----DDNPIPDIVLRDASDWTKVNHGMQQVMHGARGTARKAAVGAQYRI 535
           + T E    V     +   I DI    +  W  V  GM  V +   GTA K    + Y+I
Sbjct: 488 SSTQENNTQVPYRQSEHQQIGDI---RSGYWEIVKDGMYGVANRQNGTAHKFFADSSYKI 544

Query: 536 AGKSGTAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADDPKIVVAVMVENGESGSGVA 595
           A KSGTAQV  +K+ E Y+  ++ ER RDH L V FAP  +PK+ +++++ENG +G  V 
Sbjct: 545 AAKSGTAQVFGLKENETYNANRIAERLRDHKLMVAFAPYSNPKVAMSIILENGGAGPAVG 604

Query: 596 APVVRQVMDAWLLADDGRLKPEYGGPPS 623
             +VRQ++D  +L D+    P+   PPS
Sbjct: 605 T-IVRQILDHIMLGDNNTSLPD--APPS 629