Pairwise Alignments

Query, 381 a.a., rod shape-determining protein RodA from Pseudomonas simiae WCS417

Subject, 432 a.a., Peptidoglycan glycosyltransferase FtsW (EC 2.4.1.129) from Variovorax sp. SCN45

 Score =  167 bits (424), Expect = 4e-46
 Identities = 123/388 (31%), Positives = 208/388 (53%), Gaps = 32/388 (8%)

Query: 9   LSSEDVMRRRATLLQRMHIDGPLLILLLTLAAGSLFVLYSASGKNWD------------- 55
           L    + + +AT ++ +  D  L+ + + L    L ++YSAS    D             
Sbjct: 39  LGGAGIAQTKATPMRVLGFDQALVWVTVALLTWGLIMVYSASIALPDNPRFARAGYSASY 98

Query: 56  LLIKQASSFGLGLLSMVVIAQLEPRFMARWVPLGYVAGVLLLVVVDV--MGHNAMGATRW 113
            L + A+S     ++ ++  Q+  +   R  P  +VA +LLLV V +  +G N  GA RW
Sbjct: 99  FLTRHAASVVFAFVAALLTFQIPMKTWERAAPWLFVASLLLLVAVLIPHIGINVNGARRW 158

Query: 114 INIPGVIRFQPSEFMKILMPATIAWYLSKRTLPPQ-----LKHVGISLILIGVPFILIVR 168
           + + G +RFQPSE  K+ M    A Y+ ++    +     +  +GI+++++G+   L++ 
Sbjct: 159 LPM-GFMRFQPSELAKLAMVLYAASYMVRKMEIKERFFRAVLPMGIAVVVVGM---LVMA 214

Query: 169 QPDLGTSLLILAGGAFVLFMGGLRWRWILSVLAAAVPVAVAMWFFFMHDYQKQRILTFLD 228
           +PD+G  ++I      +LF+GG+  R    V+AA V VA          ++++RI  +LD
Sbjct: 215 EPDMGAFMVIAVIAMGILFLGGVNARMFF-VIAALVVVAFGT-IVATSPWRRERIFAYLD 272

Query: 229 P--ESDPLGTGWNIIQSKAAIGSGGVFGKGWLLGTQSHLDFLPESHTDFIIAVMGEEFGL 286
           P  E   LG G+ +  S  AIG G +FG G L G+   L +LPE+HTDF++AV+GEEFGL
Sbjct: 273 PWSEEHALGKGYQLSHSLIAIGRGEIFGVG-LGGSVEKLHWLPEAHTDFLLAVIGEEFGL 331

Query: 287 VGICALLLIYLLLIGRGLVITAQAQTL---FGKLLAGALTMTFFVYVFVNIGMVSGLLPV 343
           +G+  ++ ++L L  R + I  QA  L   F  L+A  + +      F+N+G+  G LP 
Sbjct: 332 IGVLLIIGMFLWLTRRIMHIGRQAIALDRVFSGLVAQGVGVWIGFQAFINMGVNLGALPT 391

Query: 344 VGVPLPFISYGGTSLVTLLSAFGVLMSI 371
            G+ LP +S+GG++++  L A  V++ I
Sbjct: 392 KGLTLPLMSFGGSAILMNLVALAVVLRI 419