Pairwise Alignments

Query, 381 a.a., rod shape-determining protein RodA from Pseudomonas simiae WCS417

Subject, 404 a.a., lipid II flippase from Pseudomonas putida KT2440

 Score =  150 bits (378), Expect = 8e-41
 Identities = 96/302 (31%), Positives = 163/302 (53%), Gaps = 18/302 (5%)

Query: 82  MARWVPLGYVA-----GVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKILMPATI 136
           +A W  +G++      G+L+LV+V  +G    G+ RWI        QPSE  K+ +   +
Sbjct: 81  IATWQRMGFMMLLGAFGLLVLVLVPGIGREVNGSMRWIGF-SFFNVQPSEIAKVFVVIYL 139

Query: 137 AWYLSKRTLPPQLKHVGIS---LILIGVPFILIVRQPDLGTSLLILAGGAFVLFMGGLR- 192
           A YL +R    +   +G     ++L+ +  +L++ +PD G +++++   A +LF+GG+  
Sbjct: 140 AGYLVRRQTEVRETWMGFFKPFIVLLPMAALLLM-EPDFGATVVMMGAAAAMLFLGGVGL 198

Query: 193 WRWILSVLAAAVPVAVAMWFFFMHDYQKQRILTFLDPESDPLGTGWNIIQSKAAIGSGGV 252
           +R+ L V+ A + V V +       Y+  R++TF DP +D  G+G+ + Q+  A G G  
Sbjct: 199 FRFSLMVVLAVLAVFVLVQ---AQPYRMARLITFTDPWADQFGSGYQLTQALIAFGRGEW 255

Query: 253 FGKGWLLGTQSHLDFLPESHTDFIIAVMGEEFGLVGICALLLIYLLLIGRGLVI---TAQ 309
            G G     Q    +LPE+HTDF+ +V+ EE G+VG    + +++ +  R L I     +
Sbjct: 256 LGVGLGNSVQKQF-YLPEAHTDFVFSVLAEELGVVGSLLTVALFVFVTVRALYIGLWAEK 314

Query: 310 AQTLFGKLLAGALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLM 369
           A+  F   +A  L   +     +NIG+  GLLP  G+ LPF+SYGG+SLV   +  G+L+
Sbjct: 315 AKQFFAAYMAFGLAFLWIGQFLINIGVNVGLLPTKGLTLPFLSYGGSSLVICCACVGLLL 374

Query: 370 SI 371
            I
Sbjct: 375 RI 376