Pairwise Alignments

Query, 381 a.a., rod shape-determining protein RodA from Pseudomonas simiae WCS417

Subject, 434 a.a., rod shape-determining protein RodA from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  174 bits (440), Expect = 6e-48
 Identities = 116/389 (29%), Positives = 182/389 (46%), Gaps = 63/389 (16%)

Query: 39  AAGSLFVLYSASGKNWDLLIKQASSFGLGLLSMVVIAQLEPRFMARWVPLGYVAGVLLLV 98
           AA S+F     SGK       Q    G  +L + VI   + R       + Y   +L+L+
Sbjct: 49  AAKSIFDFSINSGK-------QLVWIGTAVLLITVIMVADYRLFDNLSLILYGIFLLILL 101

Query: 99  VVDVMGHNAMGATRWINIPGVIRFQPSEFMKILMPATIAWYLSKRTLP---PQLKHVGIS 155
           +   +G    G   W  I G  R QP EF K      +A ++ K +     P+ +   I 
Sbjct: 102 LTPFIGKEINGQRAWFEI-GPFRLQPGEFAKFATALALAKFIEKPSFDLSRPKFQFQAIL 160

Query: 156 LILIGVPFILIVRQPDLGTSLLILA----------------------------------- 180
           +I++  P  LI+ QPD GT+++ +A                                   
Sbjct: 161 IIML--PVSLIMLQPDTGTAMVYMAFFIMLYREGMPQKYYVFALVFIAISLLSLAVDNNL 218

Query: 181 -------GGAFVLFMGGLRWRWILSVLAAAVPVAVAMWFFFMH-------DYQKQRILTF 226
                  G   VL + G +  W   V    + +A+  + + +         +Q+ RI+  
Sbjct: 219 YIALPVAGLTLVLILMGKK-NWQRIVTLCMIGIAIIAYSYSLDLVVSKLPQHQQNRIMVL 277

Query: 227 LDPESDPLGTGWNIIQSKAAIGSGGVFGKGWLLGTQSHLDFLPESHTDFIIAVMGEEFGL 286
            +P+ DPLG GWN+ QSK AIGSGG +GKG+L GTQ+  DF+PE HTDFI   +GEEFG 
Sbjct: 278 FNPDIDPLGVGWNVTQSKIAIGSGGFWGKGYLEGTQTKFDFVPEQHTDFIFCTLGEEFGW 337

Query: 287 VGICALLLIYLLLIGRGLVITAQAQTLFGKLLAGALTMTFFVYVFVNIGMVSGLLPVVGV 346
           +G   ++L+++ L+ R + +  + +T F ++    +      +  +NI M  GL PVVG+
Sbjct: 338 IGSLIVVLLFVALLIRLVFLAERQKTRFSRVYGYCVISILLFHFMINISMTIGLFPVVGI 397

Query: 347 PLPFISYGGTSLVTLLSAFGVLMSIHTHR 375
           PLPF SYGG+SL +      + + + +HR
Sbjct: 398 PLPFFSYGGSSLWSFTILLFIFIKLDSHR 426