Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas simiae WCS417

Subject, 310 a.a., penicillin-binding protein 7 (VIMSS) from Escherichia coli BW25113

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 13/268 (4%)

Query: 12  LLLSLIITPAA---WAVEMVPASPQLAAKSWVLMDAASGNVLVESNGDQRLPPASLTKLM 68
           L+L++   P A    A     + P++A+ S +++D  +  V+  ++ D   P AS++KLM
Sbjct: 13  LMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLM 72

Query: 69  TAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDAS 128
           TA +  L+ R   + E   V +S+      G    +++ S+++  D+L   ++ S N A+
Sbjct: 73  TAMVV-LDARL-PLDEKLKVDISQTP-EMKGVYSRVRLNSEISRKDMLLLALMSSENRAA 129

Query: 129 VALAEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIRV 188
            +LA H  G   AF   MN     LGM N+ F+ PTGL +  + S+A D+  L  A  + 
Sbjct: 130 ASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQY 188

Query: 189 DPVHYAIYSQKEF--FWN---NIKQPNRNLLLWRDK-TVDGLKTGHTDEAGYCMVSSAVR 242
             +     ++++   F N    +   N N L++RD   +   KTG T+ AG+C+V   V 
Sbjct: 189 PLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVI 248

Query: 243 DGQRLIAVVFGTNSEQARAAETQKLLTY 270
           + + +  VV     +    A+  +L T+
Sbjct: 249 NNKPVALVVMDAFGKYTHFADASRLRTW 276