Pairwise Alignments

Query, 345 a.a., DNA polymerase III subunit delta from Pseudomonas simiae WCS417

Subject, 343 a.a., DNA polymerase III subunit delta from Escherichia coli ECRC62

 Score =  191 bits (485), Expect = 2e-53
 Identities = 123/340 (36%), Positives = 176/340 (51%), Gaps = 5/340 (1%)

Query: 1   MKLAPAQLAKHLQGGLAPVYIVSGDDPLLCQEAADAIRTAARQQGFDERQVFSADASFDW 60
           ++L P QL   L  GL   Y++ G+DPLL QE+ DA+R  A  QGF+E   FS D + DW
Sbjct: 2   IRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTDW 61

Query: 61  GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCSRPAEDTVLLISLPKLDGSA 120
             +     +MSLFA ++ L L LP   P       L+       +D +L++   KL  + 
Sbjct: 62  NAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQ 121

Query: 121 QKTKWGKALVEGAHTQFIQIWPVDSNQLPQWIRQRLSQSGLSATQDAVELIAARVEGNLL 180
           +   W  AL   +     Q    +  QLP+W+  R  Q  L     A +++    EGNLL
Sbjct: 122 ENAAWFTALANRSVQVTCQT--PEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLL 179

Query: 181 AAAQEIEKLKLMAEDGQITVETVQGAVADSARFDVFGLVDAILNGEPAHALRMLEGLRGE 240
           A AQ +E+L L+  DG++T+  V+ AV D+A F  F  VDA+L G+   AL +L+ LR E
Sbjct: 180 ALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLE 239

Query: 241 GVEPPVILWALARELRVLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ 300
           G EP ++L  L REL +L N+  Q S  TPL   F + R  VW  R+ +M +AL R S  
Sbjct: 240 GSEPVILLRTLQRELLLLVNLKRQ-SAHTPLRALFDKHR--VWQNRRGMMGEALNRLSQT 296

Query: 301 RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRL 340
           +  Q +    R +  +K     S W  L  LSLL+  + L
Sbjct: 297 QLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPL 336