Pairwise Alignments

Query, 204 a.a., putative transporter, required for glycine utilization (from data) from Pseudomonas simiae WCS417

Subject, 218 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  113 bits (282), Expect = 3e-30
 Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 14  AMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVL-LGHYPLTWVKHPEYLVLTSIAAL 72
           A+TGAL+A R+G D+ GV  +A VT +GGG +RD L L   P     H  YL+   +A +
Sbjct: 21  ALTGALTAMRKGYDFVGVFFLALVTGIGGGLLRDGLFLQQVPAVLGSH--YLLAVVVATV 78

Query: 73  VTIFIAPLMRRLRSLFLALDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILR 132
           + +     + RL  +FL +DA+GL  +T+ G   AL  G G + A + GVI  V GG+LR
Sbjct: 79  IGLVFGQSLNRLALVFLLVDALGLGLYTVFGAQKALNAGLGWIPALLIGVINAVGGGVLR 138

Query: 133 DIFCNDIPLIFR-RELYASVSFLAAW-FYMLCLYLELPSEQAILLTLFSGFLLRLLAIRF 190
           D+   + PLIFR  E YA+ S      F +L L + L ++ A L  +    L+R+ ++RF
Sbjct: 139 DLMSREDPLIFRPGEFYAAASLAGGMVFAVLALGMGLAAQLAALAGIGVTVLVRVASVRF 198

Query: 191 HWEMP 195
            W  P
Sbjct: 199 GWRTP 203



 Score = 39.3 bits (90), Expect = 5e-08
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 1/102 (0%)

Query: 1   MLLMLYLIAITAEAMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH 60
           + L++  + +    + GA  A   G+ W   +LI  + A+GGG +RD++    PL + + 
Sbjct: 93  VFLLVDALGLGLYTVFGAQKALNAGLGWIPALLIGVINAVGGGVLRDLMSREDPLIF-RP 151

Query: 61  PEYLVLTSIAALVTIFIAPLMRRLRSLFLALDAVGLVAFTLI 102
            E+    S+A  +   +  L   L +   AL  +G+     +
Sbjct: 152 GEFYAAASLAGGMVFAVLALGMGLAAQLAALAGIGVTVLVRV 193



 Score = 38.9 bits (89), Expect = 7e-08
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 86  SLFLALDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRD-IFCNDIPLI 142
           +L LA D      F L G +TA+  G+  +      ++TG+ GG+LRD +F   +P +
Sbjct: 7   TLPLAFDLAATFLFALTGALTAMRKGYDFVGVFFLALVTGIGGGLLRDGLFLQQVPAV 64