Pairwise Alignments

Query, 796 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 916 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens GW456-L13

 Score =  207 bits (527), Expect = 2e-57
 Identities = 211/765 (27%), Positives = 335/765 (43%), Gaps = 45/765 (5%)

Query: 31  GRAIQVLEDPTDALTIADVSAPSATPQFKPHDKDTLNAGYSRSVFWLKVNLHYLPTQAEA 90
           G    VL D    L ++D+ +   T QF P + D + A       WL+  L      A  
Sbjct: 19  GSGWAVLLDEQGDLQLSDIRSARYTNQFSPIELDHITAAEPDGALWLRFRL------APG 72

Query: 91  QRTWLLELAYPPLDHLDLYLPDSSGTYRLAGRTGDALPFSAREIRQNNYLFKVDFAPGEA 150
           +   LL +  P L   ++Y+ D       +  TG+  P S R +  ++++  +  +    
Sbjct: 73  KHEQLLRVFAPDLRQFNMYVLDGDKLIDQSS-TGNEHPQSERPLPSSDFMLALPQSDTPL 131

Query: 151 KTVYLRLQSEGSIQAPLTLWSSTAYLEQQPLRLYVLGLIYGVLLGMLVYNLFIYLSVRDT 210
             VYLRL S+  ++  +TL S+      Q   L + GL++G +  ++++NL  Y   R  
Sbjct: 132 D-VYLRLASDHQLRPYITLQSAINSAANQNQTL-IYGLLFGCIAMLILHNLIRYAYTRSH 189

Query: 211 SYLYYIFYIASFGMYQLSVNGAAVEYFWPNNPWWANAATP----FLIGSAALFGSLFARS 266
           S L+        G+  LS+    +    P  P W    TP     L+ +A     L  R 
Sbjct: 190 SALWLA---TCEGLLMLSLL-LLLNLAGPWLPDWHALQTPGAYLALLMTAPCGLMLAYRF 245

Query: 267 FLHTAQHSRWINRLLLALVACGGVVMLLSLMTSYALALRLATGLALVFTVTIFVAAIKAW 326
           F     H   +NRLLL  V       L+ L  +      +  GL  +  +T+   +   W
Sbjct: 246 FAPLGPHP--LNRLLLGEVVLITACSLMLLFVNTLPLNFITYGLVALAGLTMLFISAYHW 303

Query: 327 YCGQRVARYFIIAWSAFLLGGVVNTLMVLGYL---PNVFLTMYASQIGSAIEVALLSLAL 383
             G R AR F+ A + F LG +V    +LG     P+  +T   + I   I   L+S+AL
Sbjct: 304 QKGYRPARLFVAAMAVFNLGTLVILPALLGLTLIEPHGLITTLLAFI--CISGLLMSIAL 361

Query: 384 ADRINSMREQQAQILFDASQKLEVLNQQLARSNRLKDEFLATLTHELRTPMNGVIGSLEL 443
           ++R   + E +    F  S+ L   N ++      K EFLA ++HE+RTPMNGV+G  EL
Sbjct: 362 SERQRRITEDR----FSISRDLAASNAEI----NAKAEFLAKISHEIRTPMNGVLGMTEL 413

Query: 444 MQTVPLDADLAQYHQTAAGSARDMMRMVNGILTLTELQAGRLSAQPQVFSLRGTLDTLRQ 503
           +   PL      Y QT   +  +++ ++N IL +++L++G++      F L   ++    
Sbjct: 414 LLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLS 473

Query: 504 QFTANAQSKGLAFSIDVADELPDRVLGDADKLLQSLDCLLDNAFKFTHEGSVRLRVVGVP 563
            F A A+ + +     +  ++P  + GD  +L Q+L  LL+NA K T EG + L VV + 
Sbjct: 474 IFRAKAEQQNVELISFIQPQVPRVISGDPTRLRQTLLSLLENALKKTDEGEI-LIVVALD 532

Query: 564 QSDGGLRLSFIVTDTGIGF-AFLDEATLYQRFFQLDGSTTREYGGLGIGLAICRQLIELL 622
           + +   RL   V D+G    A   +A ++         +  + GG  +GL I RQLI L+
Sbjct: 533 ERNTKPRLRIAVQDSGEPMDAEERDALMHAELHSRHFLSATQLGG-NLGLVIARQLIRLM 591

Query: 623 GGRLTHHSEPRKGSRFQLELEVSPVASDSKPAPDRQRAPQECSVLLVDDNSVGQLVVRGM 682
            G     S   +GS   L L + P   +  P  D     Q   VL+VDDN   + V+   
Sbjct: 592 QGEFGIKSGNNQGSTLWLTLPLDPDRLE-HPTSDLDGPLQGARVLVVDDNDTCRKVLVQQ 650

Query: 683 LLKLGYRVKTVDTGPNALAALQA-----GDFDAVLLD--IP-EGGFSLCCQIRALPGCG- 733
               G  V    +G  ALA L+        FD VLLD  +P   G  L  +I+  P    
Sbjct: 651 CSAWGLNVSAASSGKEALALLRTKAHLRDYFDIVLLDQNMPGMTGMQLAAKIKEDPSLNH 710

Query: 734 ELPVIALSTSLNVSERERCHGIGVSEHLVKPVRFEALQAVLERRL 778
           ++ +I L+   N   +      G+   L KPV    L+  L   L
Sbjct: 711 DILLIMLTGISNAPSKIIARNSGIKRILAKPVAGYTLKTTLADEL 755



 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 6/123 (4%)

Query: 659 RAPQECSVLLVDDNSVGQLVVRGMLLKLGYRVKTVDTGPNALAALQAGDFDAVLLDIPE- 717
           + P +  +L+ +DNS+   V+RGML KL  +  T   G  AL A++A  +D VL+D    
Sbjct: 777 KVPCDFRILVAEDNSISTKVIRGMLSKLNLQPDTACNGEEALQAMKAQRYDLVLMDCEMP 836

Query: 718 --GGFSLCCQIRALPGCGE---LPVIALSTSLNVSERERCHGIGVSEHLVKPVRFEALQA 772
              GFS   Q+RA     +    PV+AL+  +    +ER    G+  H+ KPV    L+ 
Sbjct: 837 ILDGFSATQQLRAWEVGNQRVRTPVVALTAHILAEHKERARQAGMDGHMAKPVELSQLRE 896

Query: 773 VLE 775
           ++E
Sbjct: 897 LIE 899