Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 210 a.a., 23S rRNA pseudouridine 2457 synthase from Pseudomonas putida KT2440

 Score =  359 bits (921), Expect = e-104
 Identities = 176/211 (83%), Positives = 191/211 (90%), Gaps = 1/211 (0%)

Query: 1   MSRPTRPDSRRPGVKPPYSATRRVAKAPPAEPKLILFNKPFDVLTQFSDEGGRATLKDFI 60
           MS P R   RRP  +P  +  RR AKAPPAEP+LILFNKPFDVLTQFSD  GRATLKDFI
Sbjct: 1   MSLPPRNKPRRPQARPA-AGPRRQAKAPPAEPRLILFNKPFDVLTQFSDGEGRATLKDFI 59

Query: 61  AIPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPTEEQLQRLRD 120
            IPG+YPAGRLDRDSEGLLLLTNDG LQARIADPKHKLAKTYWVQVEGEP++EQLQRLRD
Sbjct: 60  DIPGVYPAGRLDRDSEGLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSDEQLQRLRD 119

Query: 121 GVELNDGKTLPAQARQLDEPQLWPRNPPVRFRKNIPTYWLELVIREGRNRQVRRMTAAVG 180
           GVELNDG TLPA+AR+L+EP+LWPRNPPVRFRK++PT WLELVIREGRNRQVRRMTAAVG
Sbjct: 120 GVELNDGPTLPAEARRLEEPELWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVG 179

Query: 181 LPTLRLVRVRIGDWTIDGLDQGQWKEVPARL 211
           LPTLRLVRVRIGDW +DGL+QG W+EVPARL
Sbjct: 180 LPTLRLVRVRIGDWALDGLEQGCWREVPARL 210