Pairwise Alignments

Query, 836 a.a., ATP-dependent helicase from Pseudomonas simiae WCS417

Subject, 1301 a.a., ATP-dependent helicase HrpA from Pseudomonas putida KT2440

 Score =  249 bits (635), Expect = 9e-70
 Identities = 169/471 (35%), Positives = 248/471 (52%), Gaps = 29/471 (6%)

Query: 2   NSLPIDEVLPALRDALANRHEAVLEAPPGAGKTTRVPLALLNEPWLAGQTILMLEPRRLA 61
           ++LPI      ++ ALA     V+    G+GKTT++P   L     +   I   +PRR+A
Sbjct: 68  DNLPIAAKRDEIKKALAENQVLVIAGETGSGKTTQLPKICLELGRGSHGLIAHTQPRRIA 127

Query: 62  ARAAAERLASELGEKVGETVGYRIRLDSKVGPNTRIEVVTEGILTRRLQDDPALDGVGLL 121
           AR+ A R+A ELG  +G  VGY++R + +   NT ++++T+GIL    Q D  L+    +
Sbjct: 128 ARSVAARVAEELGTPLGALVGYQVRFEDQSDSNTLVKLMTDGILLAETQHDRFLERYDTI 187

Query: 122 IFDEFHERSLDADLALALSLNGRELFRDDQPLKILLMSATLEGERLAGLLDNAPILRSEG 181
           I DE HERSL+ D  L      + L      LK+++ SAT++ ER +   D API+   G
Sbjct: 188 IVDEAHERSLNIDFLLGYL---KTLLHRRPDLKLIITSATIDLERFSRHFDGAPIIEVSG 244

Query: 182 RMFPVQMRWGRPY-----QPGEFIEP-----RVVQTVLDALQDET-------GSVLVFLP 224
           R FPV   W RP      + G  IE      + +   LD L           G VL+FLP
Sbjct: 245 RTFPVDT-WYRPLTSEQDEEGNQIEDDLTVDQAILATLDELAQHERSEGKGPGDVLIFLP 303

Query: 225 GQAEIRRVNQQLADALGERADVVLCPLHGELDLNAQRAAIDPAPVGKRKVVLATNIAETS 284
           G+ EIR   + L  A     +++  PL+  L    Q+    P     R+VVLATN+AETS
Sbjct: 304 GEREIRDAAEILRKAQLRHTEIL--PLYARLSPAEQQRIFQPHT--GRRVVLATNVAETS 359

Query: 285 LTINGVRVVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSE 344
           LT+ G+R VID G AR+ R+   + + RL  + +S+ASA QR GR GR+EPG+C RL+SE
Sbjct: 360 LTVPGIRYVIDTGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYSE 419

Query: 345 DQHEGLAAYGSAEILAADLAGLALQL--ARWGVTPTQLVWLDVPPTAAYAQAQDLLGRLG 402
           +      A+   EIL  +LA + LQ+   R G       +++ P   A +   +LL  L 
Sbjct: 420 EDFNSRPAFTDPEILRTNLAAVILQMLHLRLGAIDA-FPFIEPPDGKAISDGFNLLQELS 478

Query: 403 ALD-EEKLTAHGQKMAELPAHPRIAHLLLRGQALGLAATACDVAALLGERD 452
           A++ E +LT  G+++A LP  PR+  +LL G  LG       V + L  +D
Sbjct: 479 AVNRENQLTPIGRQLARLPIDPRLGRMLLEGARLGSLQEVLIVTSALSVQD 529