Pairwise Alignments

Query, 298 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  101 bits (251), Expect = 2e-26
 Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 5/281 (1%)

Query: 18  LYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPAPTWPQWKAAGMIG 77
           L  +W ++Y  I+IGVE  PPL     R   AG L+   +R RG+  P  P       + 
Sbjct: 17  LSTLWAASYTFIKIGVETIPPLTFIAARTLIAGLLLLVVIRLRGLRLPRDPATWRLFFVQ 76

Query: 78  LLLLTVGNGGVSVAEHMGVSSGVAALAVATVPLFTLLCGYFWGARNT--RLEWAGVILGI 135
             + +V    +       + +G+A +  AT P+FT L         T    +  G I G+
Sbjct: 77  ACINSVLPFTLIAWAEQSIDAGLAVILNATTPIFTFLLTALVIRHETVSGRKLFGTIAGM 136

Query: 136 IGIAMLNMGSTLQSSP---MGAVLLLVAAASWAFGSVWSRQLPLPQGAMASAAEMLVAGV 192
            G+ ++     L  +       + +L AA S+A  +++S+        M +A  ++   V
Sbjct: 137 TGVCLIIGVEALGGAGEAIWSQLAVLTAAFSYACAAIFSKNFKGLDPVMPAAGSLICGAV 196

Query: 193 ALLMVSALSGERLQAVPPLEGWLALAYLTVFGSIIAFNAYMYLLKHVRPAAATSYAYVNP 252
            LL VS +        P      AL  L+VF + +AF  Y  L++ +     TS AY+  
Sbjct: 197 LLLPVSLIVDRPWTLSPSAASLTALVCLSVFSTALAFMIYFRLMQTLGSVGTTSQAYLRV 256

Query: 253 AVAVLLGIVFVGETIGLEEALAMLVIISAVLLISLPQWRKP 293
            V V +G+VF+GE       + ++ +I+ VL ++LP  R+P
Sbjct: 257 PVGVAIGMVFLGEVPTSAMWVGLVCVIAGVLAMTLPSRRRP 297