Pairwise Alignments

Query, 298 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 76/284 (26%), Positives = 143/284 (50%), Gaps = 15/284 (5%)

Query: 13  AAFFALYVIWGSTYLVIRIGVEYWPPLLLAGIRFCTAGALMYGFLRWRGVPAPT-WPQWK 71
           A   AL ++WG ++  I + V+  PP+ +  +R   A   +    R  G+  P  W  W+
Sbjct: 7   AMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWR 66

Query: 72  AAGMIGLLLLTVGNGGVSVAEHMGVSSGVAALAVATVPLFTLLCGYFWGA--RNTRLEWA 129
           A   +GLL   +    + V     ++SG+A++  AT PLFT++  +F  A  + T  + A
Sbjct: 67  AFFGMGLLNNIIPFCLI-VWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMTGNKLA 125

Query: 130 GVILGIIGIA-MLNMGSTLQSSPM-GAVLLLVAAASWAFGSVWSRQLP-LPQGAMASAAE 186
           GV++G +G+A M+   +   SS + G + +L AA S++F  ++ R+   +    + +A  
Sbjct: 126 GVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVPPLMTATG 185

Query: 187 MLVAGVALLMVSALSGER--LQAVPPLEGWLALAYLTVFGSIIAFNAYMYLLKHVRPAAA 244
            + +   +L+ +AL  ++    A+P L  W AL  + +  + +A   Y+   + +  A A
Sbjct: 186 QISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALA---YLIFFRILASAGA 242

Query: 245 TSYAYVN---PAVAVLLGIVFVGETIGLEEALAMLVIISAVLLI 285
           T+ A V    P  A+LLG + +GE + ++    M +I + +  I
Sbjct: 243 TNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAI 286