Pairwise Alignments

Query, 292 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 298 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score = 63.5 bits (153), Expect = 5e-15
 Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 20/284 (7%)

Query: 21  VLATFLFSSHDALSKYLAGFYPIVMVVWARYLVHTLLMAGIFLPQSGLRVLRSKRPGMQV 80
           +LA  ++S +  +SK  AG      + + R+L+  LL   + L +  LR  R+ RP +  
Sbjct: 8   LLAVVIWSGNTVVSKMAAGTIAPAEISFYRWLLAALLFTPLAL-RPVLRNWRAIRPQLGR 66

Query: 81  VRALCLLGTSLFFTTALHYIPLAEAT---AVNFLAPILVTALSVPLLGEHVTRGQWLAVI 137
           +  L LLG  ++ + A +   L  AT    +  L P++V ALS+ LLG+ +T G     +
Sbjct: 67  IAVLGLLGMVVYQSLAYYAAYLTTATHMGIIGSLTPMMVLALSIVLLGQRLTAGAVAGSL 126

Query: 138 CGFVGVLIIIHPG--GELFTPAVL----LPLCSALFFCFYQLLTRILSQYDTPTTSNFFA 191
              +GVL+++  G  G L          L L + L +  Y +L +       P     + 
Sbjct: 127 VSIMGVLVVVSSGDLGTLLKSGANMGDGLMLLAMLAYAIYVILLKRWGMKGVPALQLLYL 186

Query: 192 GLCNTLVMSAMVPFFWQVPTLWHGALMLAL-GTCG----MTAHLMLTQAFRFAAPALLAP 246
            +   ++  A++P +   P +   A  L L G  G    M A L+         P+  + 
Sbjct: 187 QIVFAVI--ALLPLYLLTPRMGLSAANLPLIGFAGLGASMLAPLVWMHTVAHIGPSRASM 244

Query: 247 FGYCQIVFAGLLGWLVFNHTPDVTTVVGIGVICMSG--LAAAWQ 288
           F     +F  L+  +V   +      +G GV+ ++G  LA  W+
Sbjct: 245 FFNLIPLFTALIAAVVIGESLAAYHAIG-GVLTVAGVLLAELWK 287