Pairwise Alignments

Query, 292 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 305 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 87/299 (29%), Positives = 127/299 (42%), Gaps = 22/299 (7%)

Query: 6   PLSGVNHP--FKGILLIVLATFLFSSHDALSKYLAGFYPIVMVVWARYLVHTLLMAGIFL 63
           PLS    P      L+  L   LFS  DA  K L+    +   +  R +  +LL   + L
Sbjct: 4   PLSSPRSPSVLLPFLICCLGVALFSVMDAAMKGLSLSIGLYNALLWRAITGSLLGLALML 63

Query: 64  PQSGLRVLRSKRPGMQVVRALCLLGTSL-----FFTTALHYIPLAEATAVNFLAPILVTA 118
                   R + P   V+R   L G  +     FF  A+  +PLAEA A++F+AP++   
Sbjct: 64  ------ATRQRWPNRSVLRLHLLRGVVVALMASFFFWAIMRLPLAEAIALSFIAPLIALY 117

Query: 119 LSVPLLGEHVTRGQWLAVICGFVGVLIII-------HPGGELFTPAVLLPLCSALFFCFY 171
           L+  LL E + R    A + G VGV +I+       + G  L     +L   SA+ F + 
Sbjct: 118 LAALLLKERIGRQAIGASLLGLVGVGVILSGRMRGDYDGDALMGAGAVL--LSAMLFAWN 175

Query: 172 QLLTRILSQYDTPTTSNFFAGLCNTLVMSAMVPFFWQVPTLWHGALMLALGTCGMTAHLM 231
            +L R  +Q  +P    FF  L    V +   P +  VPT     L+L       T+   
Sbjct: 176 LILQRQQAQLASPIEVAFFQHLVMLGVFAIGAPAWAIVPTGSAVPLVLLAAILAFTSLAA 235

Query: 232 LTQAFRFAAPALLAPFGYCQIVFAGLLGWLVFNHTPDVTTVVGIGVICMSGLAAAWQQR 290
           L  A+  A    L P  Y   V+A + GWL F     +TT+ G  +I    L AA  +R
Sbjct: 236 LAWAYARAEAQRLIPVEYTAFVWAAIFGWLAFGEQLTLTTLAGALLIVAGCLIAARTKR 294