Pairwise Alignments

Query, 292 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 303 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  111 bits (278), Expect = 2e-29
 Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 8/266 (3%)

Query: 19  LIVLATFLFSSHDALSKYLAGFYPIVMVVWARYLVHTLLMAGIFLPQSGLRVLRSKRPGM 78
           L++  T +     AL K     YP   +V+ R +V  + +  +     G  ++R K P  
Sbjct: 25  LLLDMTLVSGGMTALVKAQGVTYPAFQLVFIRAMVGLIFILPLIWRHRG-EMVRVKYPWR 83

Query: 79  QVVRALC--LLGTSLFFTTALHYIPLAEATAVNFLAPILVTALSVPLLGEHVTRGQWLAV 136
            + R  C  +  TS F    L  +PLA   AV F  P++  A++V  LGE V+R +W+  
Sbjct: 84  NLFRICCNAIALTSNFIAITL--LPLATVNAVGFSRPLVTMAMAVAFLGETVSRFRWVGA 141

Query: 137 ICGFVGVLIIIHPGGELFTPAVLLPLCSALFFCFYQLLTRILSQYDTPTTSNFF-AGLCN 195
              FVGVL++I P G  F   VL+ L S +F     + TR L Q +T     F+  GL  
Sbjct: 142 SLAFVGVLVVIGPDGAEFGVGVLVVLVSVVFGALAVIQTRALRQENTTVMMVFYTVGLAV 201

Query: 196 TLVMSAMVPFFWQVPTLWHGALMLALGTCGMTAHLMLTQAFRFAAPALLAPFGYCQIVFA 255
              + A+  + W+    +    +L +G           +A+R A  ++LAP GY  I+F 
Sbjct: 202 ITAIPAI--WTWKPVASFDWVALLGIGLLAQMGQYCFLRAYRIADASVLAPVGYLSILFV 259

Query: 256 GLLGWLVFNHTPDVTTVVGIGVICMS 281
             +G+ +F+  P+   V+GI +I +S
Sbjct: 260 TAVGYFLFDEVPENRVVLGIAIILVS 285