Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas simiae WCS417

Subject, 203 a.a., Peptidoglycan-associated lipoprotein from Xanthobacter sp. DMC5

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 109 VEAMAEQVEQERLELLLQELQNKVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFD 168
           +E ++E+      + L   +QN + +NP     +  ++ ++       Q+     +  F 
Sbjct: 39  LEGLSEKAPTITAQQLRSMVQNHMAQNPGEALTRPSLALKLD------QLPQINVQIQFR 92

Query: 169 SGSARLKPYFEDILLAMADTIKAV---PNKISISGHTDAKPYAGQGDFGNWELSANRANA 225
            GSA ++P     L A+AD +        K  ++G+TD     G  D  N  LS  RA+A
Sbjct: 93  LGSAIIEPSSYGTLGAIADAMHNPILHGYKFIVTGNTDV---TGPRDV-NLRLSQARADA 148

Query: 226 ARRALVAGSYPDPQVARVVGFASSQLFDAKDPFNPINRRIDIVVLTKKA 274
              ALV+    +P     VG     L D K P +PINRR+ I  + + A
Sbjct: 149 VVSALVSVFNINPTRLEAVGLGEEVLLDPKRPTDPINRRVQIFTVGRLA 197