Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas simiae WCS417

Subject, 429 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 129 QNKVEENPQLLKFKDQISFEITPDGLRIQITDAANRP--------MFDSGSARLKPYFED 180
           Q KV E P+L  F      E    G R+ + DA +R         +F S S+ +   ++ 
Sbjct: 279 QPKVIERPRLAGFL----VEDIKAG-RVAVEDAVDRSVVTIRGDELFASASSSIVDDYQP 333

Query: 181 ILLAMADTIKAVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGS-YPDPQ 239
           ++L +AD I+ V  ++ ++GH+D +P A      NW LS  RA +    L A +   D  
Sbjct: 334 LMLRIADAIRKVKGQVRVTGHSDNRPIATLRFPSNWALSEARAKSVLEILAAKTGQADRF 393

Query: 240 VARVVGFASSQLFDAKDPFNPINRRIDIVVLTK 272
            A           +A       NRR++I VL +
Sbjct: 394 SAEGRSDTEPVATNATAEGRARNRRVEITVLAE 426