Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas simiae WCS417

Subject, 346 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

 Score =  515 bits (1327), Expect = e-151
 Identities = 262/341 (76%), Positives = 288/341 (84%), Gaps = 13/341 (3%)

Query: 1   MENNQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60
           MENNQPII+KRVKRF  GHHGGAWKIAFADFATAMMAFFLVLWL+STATPEQKIAIAGYF
Sbjct: 1   MENNQPIIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60

Query: 61  KDPIGFSESGTPFVIDLGGSPQLAPERTINPEIKTESPQEK-IPIERDTVEAMAEQVEQE 119
           +DPIGFSESGTP+VIDLGGSP++AP++TINPE+KTE  Q+    + +D VE MAEQVE+E
Sbjct: 61  QDPIGFSESGTPYVIDLGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERE 120

Query: 120 RLELLLQELQNKVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFE 179
           RLELLLQELQNKVEENPQL KFKDQI FEIT DGLRIQI DA NRPMFD GSARL+PYFE
Sbjct: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 180 DILLAMADTIKAVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239
           DILLAMADTIKAVPNK+SISGHTDAKPYAG G++GNWELSANRANAARRALVAG YPD Q
Sbjct: 181 DILLAMADTIKAVPNKVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240

Query: 240 VARVVGFASSQLFDAKDPFNPINRRIDIVVLTKKAQRAIEGD------PPPAP----QPT 289
           VARVVG+ASS LFD KDPFNP+NRRIDI+VLTKKAQR IEG+      PP AP     P 
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKKAQRNIEGEQGAPETPPAAPTAPAAPA 300

Query: 290 QGAGAPGEVPADPNAIPPGQEPLPAHELRQKLNLFDEGGVK 330
            GA      PADP A    Q P+   ELRQKLN+F++G +K
Sbjct: 301 SGAAPGASAPADPGATE--QAPMQPRELRQKLNIFEDGTLK 339