Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas simiae WCS417

Subject, 285 a.a., flagellar motor protein from Pseudomonas putida KT2440

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 65/262 (24%), Positives = 101/262 (38%), Gaps = 50/262 (19%)

Query: 24  WKIAFADFATAMMAFFLVLWLMSTATP-EQKI---AIAGYFKDPIGFSESGTPFVIDLGG 79
           W +++ADF T + AFF+V++ +S+    + K+   A+ G F DP     S  P  I   G
Sbjct: 16  WLVSYADFITLLFAFFVVMYSISSINEGKYKVISQALLGVFNDP---ERSMKPIPI---G 69

Query: 80  SPQLAPERTINPEIKTESPQEK----------IPIERDTVEAMAEQVEQERLELLLQELQ 129
             Q    R   P +K     E             I  D  +A  + +  +++ +   EL 
Sbjct: 70  DEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISDDVRDAFGDLINSDQMTVRGNELW 129

Query: 130 NKVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFEDILLAMADTI 189
            ++E N  LL                           F SG A        I+  +A  +
Sbjct: 130 IEIELNSSLL---------------------------FGSGDAMPSDKAFAIIEKVASIL 162

Query: 190 KAVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQVARVVGFASS 249
           K   N + + G TD  P        NWELS+ RA +  R L+A    +P     VG+   
Sbjct: 163 KPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVR-LLAMEGVNPARMASVGYGEY 221

Query: 250 QLFDAKDPF--NPINRRIDIVV 269
           Q   + D       NRR+ +V+
Sbjct: 222 QPVASNDTAEGRARNRRVVLVI 243