Pairwise Alignments

Query, 444 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 467 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  305 bits (782), Expect = 2e-87
 Identities = 165/455 (36%), Positives = 249/455 (54%), Gaps = 40/455 (8%)

Query: 28  AVGKTRWGMLALVFFATTLNYIDRAALGVMQPILAKEMSWTAMDYANINFWFQVGYAIGF 87
           AVG  RW + A++FFATT+NY+DR  L ++ P L+ +  W+  DYANI   FQ  YAI  
Sbjct: 15  AVGNYRWTICAMLFFATTVNYLDRQVLSLLAPQLSTQFGWSNTDYANIAAVFQFVYAISM 74

Query: 88  VLQGRLIDRVGVKRVFFCAVLLWSLA-----------------TGAHGLAT---SAVGFM 127
           +  GR +D++G K  +  A+ +WS                   +GA GLA    S  GFM
Sbjct: 75  LFAGRFVDKIGTKAAYVVAIAIWSTGAIMHAFSVPMGEGIAAISGAIGLAVIPVSIAGFM 134

Query: 128 VCRFILGLTEAANYPACVKTTRLWFPAGERAVATGIFNAGTNVGAMMTPMLLPLILHVWG 187
           + R +L + EA N+P  +K T  +FP  ER++ATGIFN+G NVGA++ P+ +PLI  +WG
Sbjct: 135 LSRAVLAIGEAGNFPIAIKATAEYFPKKERSLATGIFNSGANVGAILAPICVPLIAGLWG 194

Query: 188 WQAAFLCMSALGGIWLVFWGLKYFNPEDHPSVKQSELDYVL--QEAEPEQP--------R 237
           W+AAF+ +  LG +W+V W   Y  PE+   +   EL Y+   Q  +P  P        +
Sbjct: 195 WEAAFIVIGGLGFVWVVVWIALYQKPEEQKRLSPEELAYIRSDQTVQPFTPAPAGAPEKK 254

Query: 238 VPFTRILRMRGTWAFALAYSMTAPVFWFYLYWLPPFLNQQYNLGINVTQMGIPLIIIYLT 297
           V + ++L  R TWAFA    MT  V+WF+L+WLP +L+ QY  G+    + +PL ++Y  
Sbjct: 255 VSWFKLLTYRQTWAFAFGKFMTDGVWWFFLFWLPTYLSAQY--GMKGADIVMPLAVLYSM 312

Query: 298 ADFGSVGGGILSSFLIGRGMNSIKARLLSMLLFACCIVGVIMA--AGSSQLWVAVFAISL 355
              GS+GGG   S+ + RG      R+ +ML+ A   + V++A   G    WV V  I +
Sbjct: 313 TMVGSIGGGWFPSYFMARGDAPYDGRMKAMLVIALFPLVVLLAQPLGYISFWVPVLLIGV 372

Query: 356 AIGAHQAWTANIWSLVMDYTPKHMMSTVFGFGGMCAAIGGMFMTQIVGHILTV------T 409
              AHQAW+ NI++ V D  P+  +++V G GGM   +GG+ MT+I G +          
Sbjct: 373 GASAHQAWSCNIFTTVSDMFPQKTVASVVGIGGMAGGLGGVVMTKIGGWVFDYYKSVGDI 432

Query: 410 NNNYTVLFTLIPAMYFIALTWMYFMAPRKIPTVDV 444
           +  Y ++F +    Y +A + M  + PR     D+
Sbjct: 433 HTGYMIMFAICALAYLVAWSVMKTLVPRHKEITDL 467