Pairwise Alignments

Query, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

Subject, 159 a.a., Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily from Pseudomonas fluorescens GW456-L13

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 49/146 (33%), Positives = 84/146 (57%), Gaps = 3/146 (2%)

Query: 20  YLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNLLIDHIRQEARRKTD 79
           +L  ++ + Q+A D+V +++LR+ E+ +   I+  + +LYRTA NL+ID  R+   R+ +
Sbjct: 11  FLNARLGNRQVAEDVVHDAYLRVLERSSDTPIEQPRAFLYRTALNLVIDDHRRNTLRQAE 70

Query: 80  AVPHEALAEIEDEVAGLEAQAMAQQQR-QALKQALAELPERTQQIFRLNRIEGMTHAQVA 138
             P E L   E          +   QR + L+ ALAELP   ++ F L +IEG++H Q+A
Sbjct: 71  --PLEVLDNEERYFTPSPHNVLDHGQRLEMLQCALAELPRLCRESFLLRKIEGLSHPQIA 128

Query: 139 RHLDISDSSVQKHLAKALAYVMQRLQ 164
             L IS + V+KH+  A+ +   R++
Sbjct: 129 EQLGISRAMVEKHIVNAMKHCRIRMR 154