Pairwise Alignments

Query, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

Subject, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 1e-21
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 5/157 (3%)

Query: 17  LRGYLARKVRDPQLAADLVQESFLRLAEKPA----GERIDNSQGYLYRTASNLLIDHIRQ 72
           LR  L R V     AAD +QE++LRL+   +    G  ++N+  YL R A+N+  D  RQ
Sbjct: 20  LRSKLERIVGSRDDAADAMQETWLRLSTTSSSTSDGGTVNNADAYLLRMAANIATDQYRQ 79

Query: 73  EARRKTDAVPHEALAEIEDEVAGLEAQAMAQQQRQALKQALAELPERTQQIFRLNRIEGM 132
                      E L  I DEV+  E  A A+   QAL Q L  +P R ++I    R+EG 
Sbjct: 80  NNVLLVHGEIDE-LMHIVDEVSDPERIASARSDVQALSQVLGRMPRRRREILVAARVEGQ 138

Query: 133 THAQVARHLDISDSSVQKHLAKALAYVMQRLQDGEVA 169
            + ++AR  D+S S+V+K L  AL +  Q L D E A
Sbjct: 139 LNDEIARRFDVSLSTVEKELRAALEFCKQHLPDVEAA 175