Pairwise Alignments

Query, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

Subject, 173 a.a., RNA polymerase sigma factor from Pseudomonas fluorescens SBW25

 Score =  330 bits (847), Expect = 6e-96
 Identities = 170/173 (98%), Positives = 173/173 (100%)

Query: 1   MSDVDLKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYR 60
           MSDVDLKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYR
Sbjct: 1   MSDVDLKGLFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYR 60

Query: 61  TASNLLIDHIRQEARRKTDAVPHEALAEIEDEVAGLEAQAMAQQQRQALKQALAELPERT 120
           TASNLLIDHIRQEARRKTD+VPHEALAEIED+VAGLEAQAMAQQQRQALKQALAELPERT
Sbjct: 61  TASNLLIDHIRQEARRKTDSVPHEALAEIEDDVAGLEAQAMAQQQRQALKQALAELPERT 120

Query: 121 QQIFRLNRIEGMTHAQVARHLDISDSSVQKHLAKALAYVMQRLQDGEVAPSDE 173
           QQIFRLNRIEGMTHAQVARHLDISDSSVQKHLAKALAYVMQRLQ+GEVAPSDE
Sbjct: 121 QQIFRLNRIEGMTHAQVARHLDISDSSVQKHLAKALAYVMQRLQEGEVAPSDE 173