Pairwise Alignments

Query, 885 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 862 a.a., putative outer membrane heme receptor from Pseudomonas putida KT2440

 Score =  154 bits (389), Expect = 2e-41
 Identities = 190/740 (25%), Positives = 304/740 (41%), Gaps = 91/740 (12%)

Query: 7   GRITVSRLALAIHVGLFAAAAPVYAAQPAVKAAQPAV--LMLDIPAQSLGSAVLAFADQA 64
           G++++  LAL   +   A + P  AA+PA +A+ P +      I  Q L SA+ AF+   
Sbjct: 16  GQLSLLTLAL---LASGACSLPALAAEPA-QASSPRMGDYRFSIGQQPLVSAINAFSQVT 71

Query: 65  GLQVLFDSQRLAGLQSTTVNGQYSVQEGLARLLGNAPVEYRFNGERQVTLTRVEQSGAAL 124
           G QV F ++   G+ S  V G       L RLL    + +R      V L R   S   +
Sbjct: 72  GWQVGFSAELADGVASPGVQGSLPPDAALKRLLRGTGLSFRKISNGNVVLERQTASNV-I 130

Query: 125 ALATTTITGLHPNDWVYSTPRSVSVVGREQLDRNPPRHAAEMLEEAPGVYSAVSQQDPGL 184
           AL   T++       V   P +VSV  REQLDR    +  +++   PGV  + + Q  GL
Sbjct: 131 ALQQVTVSATRSAQDVSQVPSTVSVQTREQLDRQNVNNIQDLVRYEPGVSVSGTGQRSGL 190

Query: 185 S-VNIRGIQDYGRVNMSVDGMRQN----YQQSGHQQRNGTLYVDSELLSEVVIEKGATST 239
           +  NIRGI D  R+   VDG+       Y      QRN   YVD E++  V I +G  S 
Sbjct: 191 NGYNIRGI-DGERILTQVDGVSIPDSFFYGPYAQTQRN---YVDPEIVKRVEILRGPASV 246

Query: 240 MGGAGVIGGVANFRTVEAADLLKDGKEIGGRIRVTTGLGGRSNGTHFIGSSAFAVGTDVW 299
           + G+  IGG  ++ T++  D++K GK++G R++     G  S    ++ S+  A     +
Sbjct: 247 LYGSNAIGGAVSYFTLDPDDIIKPGKDVGARLKT----GYSSADESWLTSATVAGRQGDF 302

Query: 300 DMLLAASERHLGDYNPGTKGSIGDLRTGTSFLPNSQERIKNTTVAYSGSVMRSRLLKLGI 359
           D LL  S+R+   +   T GS            +S + +  T      +   + L KLG 
Sbjct: 303 DGLLHLSQRN--GHETETHGS------------HSGDGLSRTEANPMDARTTNVLAKLGW 348

Query: 360 NLPVDQRLQLSY----------LTTAVGYDDVNMMSAEKAQLWEKLGSSDVTAQNVALDY 409
           N   D RL  +Y          + +AVG   +       +    + G+  +T +   L++
Sbjct: 349 NYADDARLGFTYERYKDDRDQNILSAVGGPFIPGFGGMNSYRMRQ-GNDTITRERFGLNH 407

Query: 410 SYTPDNPLID-----FKAKLYYVDTRNDQSTLTRGSS--KGYEVTYQTNTYGFQAQNMST 462
            +  D+ + D     F  ++   D R D+  +  G    +  + TY+   + F AQ    
Sbjct: 408 EFDLDSVVADHVKWSFNYQIAKTDQRTDELYVASGRQVFRDRQTTYKDRQWVFDAQLDKA 467

Query: 463 FALSELSVIKANYGLEFFYDKVRPDSN------------QMVASDSAVTASAAESVTPKG 510
           F++ +   +   YG     +KV    +              +  DSA    A  S  P  
Sbjct: 468 FSIGQTDHL-FTYGTTLKQEKVTGSRSGTGTCLNIGGTCTAIGQDSARDGQALVSDFPDP 526

Query: 511 DRAMGSLFTRLDYDYDNWLNLNAGLRYDRYRLRGETGLNTRTFIIGTTRQVGLPMTYDVD 570
                SLF + +  ++NW     G RYD  R+  +    T  F+ G       P   D  
Sbjct: 527 TVNTYSLFAQDEIRWNNW-TFMPGARYDYTRMEPKF---TEEFLRGLESSGTAPTAQDDS 582

Query: 571 REEGH-FSPTFGL--SIKPGVDWLQLFATYGKGWRPPAVTETLVSGR-PHGGGSESIFPN 626
            ++ H  SP FGL  +      W   +  Y +G+R P  T   + GR  +      +  N
Sbjct: 583 DKKWHRVSPKFGLTYAFNDNYTW---YGQYAEGFRTP--TAKAMYGRFQNLDQGYRVEGN 637

Query: 627 PFLKPETSTAWEVGFNVLKEDLLFADDRAGMKVSYFNTRVDDFSYMALGVQPPGYGIANI 686
           P L+PE S ++E G       L    D     V+ F  +  DF      +       AN+
Sbjct: 638 PNLEPEKSKSYETG-------LRGNFDAGNFDVAVFYNKYRDF------IDEDAVQSANL 684

Query: 687 GNAAYVNNLETTRFRGLEYQ 706
                 NN++    +G E++
Sbjct: 685 EQTFQANNIKHATIKGAEFK 704



 Score = 30.4 bits (67), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 830 YTVYDLYSSYRATDQLTLRLAMENVTDRAY 859
           Y V DL   Y+ TD +T+   + N+TD+ Y
Sbjct: 792 YGVLDLTGYYKVTDDVTINAGLYNLTDKKY 821