Pairwise Alignments

Query, 283 a.a., flagellar motor protein MotA from Pseudomonas simiae WCS417

Subject, 246 a.a., flagellar motor protein from Pseudomonas simiae WCS417

 Score = 62.0 bits (149), Expect = 1e-14
 Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 38/259 (14%)

Query: 4   IIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVIKKSLG 63
           +IGII+ F +++GG  L  G + AL      +I+ G  +GA L  +P    +   K+++ 
Sbjct: 6   LIGIIMAFVAIIGGNYLEGGHLGALANGPAALIVIGGTVGAALLQSP----LSSFKRAMQ 61

Query: 64  -----MFGSRFTHTFYLEVLGLVYEILNKS---RREGMMAIEADIEDAAASPIFAKYPAV 115
                +F  R      +++ G +  ++N S   R+EG++ +E                  
Sbjct: 62  ILVWIIFPPR------VDLPGGIDRVVNWSLTARKEGLLGLEG----------------- 98

Query: 116 LKDERMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFG 175
           + D    +Y    L+++  G   P  +  + +++ ++ +    + +     +    P  G
Sbjct: 99  VADAEPDSYARKGLQLLVDG-AEPEAIRSILEVDFYTQESRDINAAKVFESMGGYAPTIG 157

Query: 176 IVAAVLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEI 235
           I+ AV+G++  M +L   D + +G  +  A V T +G+ +A     P+A+ L   A  + 
Sbjct: 158 IIGAVMGLIHVMGNL--ADPSQLGSGIAVAFVATIYGVASANLVLLPVASKLKSIAMRQS 215

Query: 236 NLYESIKASLVASASGMPP 254
              E +   +++ A G  P
Sbjct: 216 RYREMLLEGILSIAEGENP 234