Pairwise Alignments

Query, 359 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas simiae WCS417

Subject, 361 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas putida KT2440

 Score =  587 bits (1514), Expect = e-172
 Identities = 288/357 (80%), Positives = 315/357 (88%)

Query: 3   FDAARYTAQLQDKVTRLRDLLAPFDAPEPQVFDSPLQNFRLRAEFRLWREGGERHYAMFS 62
           FD + Y  QL  KV RLR+LLAPF APEP VFDSP +++RLRAEFRLWRE G+RHYAMF+
Sbjct: 5   FDPSSYATQLDAKVARLRELLAPFGAPEPAVFDSPREHYRLRAEFRLWREDGQRHYAMFA 64

Query: 63  QDDKRTPILIEAFPIASTRINQLMPQLKAAWQASAALSHKLFQVEFLTTLAGDAMITLCY 122
             +K   ILI+ FPIAS RIN LMP+LKAAWQAS  L ++LFQVEFLTTLAGDAMIT+CY
Sbjct: 65  PGEKHKAILIDDFPIASERINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMITMCY 124

Query: 123 HRPLDEHWHTAARQLAADLNVSIIGRSKGKRDVIGHDYVVEKLDVGGRTFSYRQPEGAFT 182
           HRPLDE W   ARQLA  L VS+IGRSKGKR VIG DY VEKLDV GR FSYRQPEGAFT
Sbjct: 125 HRPLDEAWEVEARQLAEALGVSVIGRSKGKRLVIGRDYAVEKLDVAGRVFSYRQPEGAFT 184

Query: 183 QPNGTVNQKMLNWAYEALGDRPDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNAAL 242
           QPNG VNQKML+WA+EA+G+R DDLLELYCGNGNFTLPLATRVR+VLATEISKTSVNAAL
Sbjct: 185 QPNGAVNQKMLSWAFEAIGEREDDLLELYCGNGNFTLPLATRVRQVLATEISKTSVNAAL 244

Query: 243 SNLDENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDPDT 302
           SNLDENAVDNV LVRLSAEELT+ALNEVRPFRRL GIDLKSY+FG+VFVDPPRAGMDPDT
Sbjct: 245 SNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYQFGTVFVDPPRAGMDPDT 304

Query: 303 CELTRRFDNILYISCNPETLAANIAQLHDTHKITQCAMFDQFPWTHHMESGVLLTRR 359
           CELTRRF+ ILYISCNPETLAANIAQL DTH+I +CA+FDQFP+THHMESGVLL RR
Sbjct: 305 CELTRRFERILYISCNPETLAANIAQLQDTHRIERCALFDQFPYTHHMESGVLLVRR 361