Pairwise Alignments

Query, 359 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas simiae WCS417

Subject, 370 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Enterobacter asburiae PDN3

 Score =  352 bits (904), Expect = e-102
 Identities = 174/362 (48%), Positives = 248/362 (68%), Gaps = 10/362 (2%)

Query: 7   RYTAQLQDKVTRLRDLLAPFDAPEPQVFDSPLQNFRLRAEFRLWREGGERHYAMFSQDDK 66
           +Y AQL +KV RL+ ++ PF+AP P+VF SP+ ++R+RAEFR+W +G + ++ +F Q  K
Sbjct: 10  QYDAQLAEKVVRLQSMMTPFNAPVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTK 69

Query: 67  RTPILIEAFPIASTRINQLMPQLKAAWQASAALSHKLFQVEFLTTLAGDAMITLCYHRPL 126
            + I +++FP AS  INQLM  +    + +  L +KLFQ+++LTT +  A+I+L YH+ L
Sbjct: 70  -SRIRVDSFPAASELINQLMTLIMDGVRNNPLLRNKLFQIDYLTTQSNQAIISLLYHKAL 128

Query: 127 DEHWHTAARQL---------AADLNVSIIGRSKGKRDVIGHDYVVEKLDVGGRTFSYRQP 177
           ++ W   A  L         A ++NV +IGR+   + ++  DY+ E+L V G+   YRQ 
Sbjct: 129 NDEWREQAEALRDALRDALRAQNINVHLIGRATKTKIMLDQDYIDERLPVAGKEMVYRQV 188

Query: 178 EGAFTQPNGTVNQKMLNWAYEALGDRPDDLLELYCGNGNFTLPLATRVRKVLATEISKTS 237
           E +FTQPN  +N +ML WA +A      DLLELYCGNGNF+L LA    +VLATEI+K S
Sbjct: 189 ENSFTQPNAAMNVQMLEWALKATEGSTGDLLELYCGNGNFSLALARNFDRVLATEIAKPS 248

Query: 238 VNAALSNLDENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAG 297
           V AA  N+  N +DNV ++R++AEE T+A+N VR F RL GIDLKSY+  ++FVDPPR+G
Sbjct: 249 VAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRQFNRLEGIDLKSYQCETIFVDPPRSG 308

Query: 298 MDPDTCELTRRFDNILYISCNPETLAANIAQLHDTHKITQCAMFDQFPWTHHMESGVLLT 357
           +D +T ++ + +  ILYISCNPETL  N+  L  THK+ + A+FDQFP+THHME GVLLT
Sbjct: 309 LDSETEKMVQAYPRILYISCNPETLCKNLETLGQTHKVERLALFDQFPYTHHMECGVLLT 368

Query: 358 RR 359
            R
Sbjct: 369 AR 370