Pairwise Alignments

Query, 412 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 559 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  119 bits (298), Expect = 2e-31
 Identities = 96/387 (24%), Positives = 180/387 (46%), Gaps = 9/387 (2%)

Query: 6   ALLLRHHRPFIAFWLARIFTASGFQMLTVAIGWNLYQLTGNVLDLGLVGLVEFVPRVLFM 65
           AL   ++R FI     +  +  G  M   A+ W +Y +T +   LGL   V   P  LF 
Sbjct: 10  ALQSSNYRIFIT---GQAISRVGTWMERTAVSWVVYDMTHSTFMLGLTAFVSQFPSFLFS 66

Query: 66  LHTGHVADRYERRKVAAICQTVQALIALSLAIGGLTGNVTREMIFILAFLLGAARSFEMP 125
           L+ G ++D+Y R K+  I Q    + A  LAI  L G+     I  L  LLG   +F++P
Sbjct: 67  LYGGILSDKYPRLKIVMITQVASFVQAAILAIIVLGGDTAIWHILSLITLLGIINAFDIP 126

Query: 126 TTQAMLPSIV--PSTLFPRAVASSQSAQQLATIVAPALGGL-LYAFGSVWVYGPTVALYL 182
             Q+++  ++  P+ L   AVA + S   LA ++ PA+ GL L +FG+   +      YL
Sbjct: 127 ARQSLVNELLTDPADL-SNAVALNSSVVNLARLIGPAIAGLVLSSFGAGICFSLNALSYL 185

Query: 183 IACVLTLNLPARQTPLN-KGKATLDSLLAGIRFIRSRPDILGA-ISLDLFAVLLGGATAL 240
              V    L  +  P   K ++ L  +   + +++    +    + + + ++L+     L
Sbjct: 186 AVIVSLFFLRLKPQPKKAKKQSNLSEIRDTLHYLKHHSVLAPTMLYIAIISLLVIPYNTL 245

Query: 241 LPVFAKDILLTGAWGLGLLRSAPAVGALLMSLWLARFSVDRHVGRVMFTAVGVFGVATIA 300
           LP FAK +    A   G + S+  +GA L +L+LA  + +    R++     V G   + 
Sbjct: 246 LPEFAKAVFQGNAQTYGFMVSSIGLGAFLGTLFLASLAPETKKSRILIINAAVLGGCLML 305

Query: 301 FGLSTSFWFSLAVLVVLGAADMISMVIRASFVQLETPDEMRGRVSAVNGLFIGASNQLGE 360
           F ++     +L + V+ G   +    I  + VQ  + +E RG++ ++  + +     +G 
Sbjct: 306 FSVTKLLPLALFLAVITGFTGLTQSTICLTIVQTASSEEKRGQLISLYAMALFGMMPVGS 365

Query: 361 FESGITAHWFGTVPAVVMGGIGTLVVT 387
              G+ ++  G+   +++ G+  +V++
Sbjct: 366 LLVGLVSNQIGSSTTILIQGLIAVVIS 392