Pairwise Alignments

Query, 335 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

Subject, 334 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  379 bits (974), Expect = e-110
 Identities = 178/331 (53%), Positives = 236/331 (71%), Gaps = 1/331 (0%)

Query: 5   LPLIWAVIIIFGIMMYVVMDGFDLGIGILFPFIPGKTDRDVMMNTVAPVWDGNETWLVLG 64
           LP+IW +II   ++MYVV+DGFDLGIGILFPF   + +RDVMMNTVAP WDGNETWL+LG
Sbjct: 5   LPVIWGLIIGVAVIMYVVLDGFDLGIGILFPFAKEEKERDVMMNTVAPFWDGNETWLILG 64

Query: 65  GAALFGAFPLAYSVVLSALYLPLILMLIGLIFRGVAFEFRFKAKDHKRHLWDKAFIGGSL 124
           G  L+ AFP AY+VV+ ALYLP+I+ML+ L+FRGVAFEFR+ A   +R LW+ AF  GSL
Sbjct: 65  GGGLWVAFPKAYAVVMPALYLPVIIMLLALVFRGVAFEFRWVAASSRR-LWNFAFSAGSL 123

Query: 125 AATFFQGVALGAFIDGIPVVDRQFAGGSLDWATPFTMFCGVALIVAYALLGCTWLIMKTE 184
            A FFQG+ LG  + GI V D  FAGG LDWATPF + CGV ++V YALLG TWL++KTE
Sbjct: 124 VAAFFQGIILGGLVQGITVKDGAFAGGPLDWATPFALLCGVGVVVGYALLGATWLLVKTE 183

Query: 185 GPLQEKMHNLARPLAFVVLAVIGIVSIWTPLTHPEIASRWFTLPNLFWFLPVPILVLVTM 244
           G + ++  + A PL   V+ ++G+VS+WTPL    IA+RWF+ PN+F+  PVPI+     
Sbjct: 184 GVIADRARSHAIPLLLAVVVLMGLVSLWTPLAFDRIATRWFSRPNIFFLAPVPIITAGLT 243

Query: 245 YGLFRAVARHAHYTPFLLTLVLIFLGYSGLGISLWPNIIPPSVSIWDAAAPPQSQGFMLV 304
           Y ++  +       PF  T+ L  LG+ GL IS +P ++PPS+++W  AA P SQ  ML 
Sbjct: 244 YLVWHWLKTGREMLPFFGTIGLFVLGFLGLAISTFPYLVPPSLTVWQTAAAPPSQILMLF 303

Query: 305 GTLFIIPFILGYTFWSYYVFRGKVTHEDGYH 335
           G +F++P +LGY  + Y++FRGKV   +GYH
Sbjct: 304 GVIFLLPVVLGYIVFVYWIFRGKVREGEGYH 334