Pairwise Alignments

Query, 936 a.a., 4Fe-4S ferredoxin from Pseudomonas simiae WCS417

Subject, 499 a.a., glycolate oxidase, putative FAD-linked subunit from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 1e-38
 Identities = 135/485 (27%), Positives = 207/485 (42%), Gaps = 73/485 (15%)

Query: 35  SFYRLIPQLVIRVESEDEVVALLQWAQRDHVAVTFRAAGTSLSGQAI--SDSVLIVLGDN 92
           S YR +P LV   E  ++V  LL+   +  V V  R AGT LSG A+  +  +L+V+   
Sbjct: 50  SAYRTVPLLVALPERLEQVQTLLKLCHQRGVPVVARGAGTGLSGGALPLAKGILLVMARF 109

Query: 93  WNGREIRGQGTQIRLQPGVIGAQANAWLAPFGRKIGPDPASINACKIGGIVANNASGMCC 152
               E+  QG   R+QPGV     +   AP G    PDP+S  AC IGG VA NA G+ C
Sbjct: 110 NRILEVNPQGRYARVQPGVRNLAISQAAAPHGMYYAPDPSSQIACSIGGNVAENAGGVHC 169

Query: 153 GTAQNTYHTLAGIRLVLADGSRLDTEDATSVKAFREQHGALLERLATLGRETRANAELAA 212
                T H +  + ++  +G RL                       +LG +         
Sbjct: 170 LKYGLTVHNVLKVDILTVEGERL-----------------------SLGSDA-------- 198

Query: 213 KIRHKYRLKNTTGLSLNALVDFDEPLDILSHLLVGSEGTLGFISAVTYDTVVDHPNKASA 272
                                 D P   L  L +GSEG LG ++ VT   ++  P  A  
Sbjct: 199 ---------------------LDSPGFDLLALFIGSEGMLGIVTEVTVK-LLPKPQVARV 236

Query: 273 LIV-FPDVETCCNAVTVLKTQPV--SAVELLDRRSMRSVQN--KPGMPAFVQQLSENACA 327
           ++  F  VE    AV  +    +    +E++D  ++R+ ++    G P        +A A
Sbjct: 237 ILASFDSVEDAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPV-------DAAA 289

Query: 328 LLIESRAASSSLLHEQLALIMASLAQFPVEKQVDFTEDPTENARLWAIRKDTFPAVGAVR 387
           +L+       + +++    + A L Q    ++V    D  E AR WA RK+ FPAVG + 
Sbjct: 290 ILLCELDGVEADVYDDCERVAAVLTQAGA-REVHLACDEAERARFWAGRKNAFPAVGRI- 347

Query: 388 KTGTTVIIEDVTFPVEQLAIGVNRLIELFDKHHYDEAILFGHALEGNLHFVFTQGFNSAE 447
                    D T P  +L   +  + +L  ++    A +F HA +GN+H +     N   
Sbjct: 348 --SPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVF-HAGDGNMHPLILFDANLPG 404

Query: 448 EVTRYQAFMDDVAQLVAVEFGGSLKAEHGTGRNMAPFVELEWGSDAYQLMWQLKRLLDPN 507
           E+ R +A    + +L  V+ GGS+  EHG GR     +  ++ SD   L   +K   DP 
Sbjct: 405 ELERAEAIGGKILEL-CVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPQ 463

Query: 508 GILNP 512
           G+LNP
Sbjct: 464 GLLNP 468