Pairwise Alignments

Query, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417

Subject, 557 a.a., DNA repair protein RecN from Rhodanobacter sp. FW510-T8

 Score =  433 bits (1114), Expect = e-126
 Identities = 244/556 (43%), Positives = 337/556 (60%), Gaps = 1/556 (0%)

Query: 1   MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD 60
           ML  L V ++A+VE  ++    G++V++GETGAGKS+++DAL L  G RADSG+VR G+D
Sbjct: 1   MLTSLYVRHFAVVEAAEVAFGPGLTVVSGETGAGKSLLVDALMLLAGARADSGMVRAGSD 60

Query: 61  KADILATFDLADIPEAEAWLSERDLNNEGPCILRRVITAEGRSRGYINGTPCPLGDLKAL 120
           +A++ A FDLA++PEA  WL   +L+ +G C LRRVI AEG S+ +ING P     L  L
Sbjct: 61  RAELAAEFDLAELPEARQWLRREELDEDGGCQLRRVIRAEGSSKAWINGRPANARQLGEL 120

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQELERLSNSG 180
             LL++IH QHEHQ+LL       LLD YAG  DL  +V+ +A +WR+    + +LS  G
Sbjct: 121 AALLVEIHGQHEHQALLSRPHQLALLDAYAGHDDLLARVRDSAVQWRELGARMRKLSG-G 179

Query: 181 DEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSG 240
           D++  R ++L ++L ELE   L   EL++LE  HK L NA  L      VVE        
Sbjct: 180 DDRDRRIEMLRHELGELEQWALPPAELDELEASHKRLANAGRLAEGTAGVVELLDGDSEF 239

Query: 241 NVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDHFDADPARLQE 300
            +  AL  +   L  + +  G L+    LL +A I++ EA   L R+    D DP R  E
Sbjct: 240 ALRRALGRAHAELGKLAAIDGKLAPLLELLDNAGIELGEAADGLVRYAQDVDLDPERYAE 299

Query: 301 IEERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDESIERLSGELASFARHYQEK 360
           +++ L  ++ L+R+HR+   E+      L  E+  L    +++E+L+ +       Y   
Sbjct: 300 VDQHLARLHELSRRHRLPLAELHDRLDALRLELGELEGAGDALEKLAAQRQRLQHDYTAA 359

Query: 361 ARELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPHGLEQVELLVSAN 420
           A +LS+ R  AA  L   V   +  LGM GG   IEL  +  +E  P G E+ ELLVSAN
Sbjct: 360 ATQLSEARADAAARLGEEVSALMAELGMAGGVLRIELEAAGGDEPDPQGRERCELLVSAN 419

Query: 421 PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR 480
           PGQP + L KVASGGEL+RISLAI+V T     V  ++FDEVD GIGG  AE+VGQ LR 
Sbjct: 420 PGQPPRLLRKVASGGELARISLAIEVATLGKDTVGCMIFDEVDTGIGGAVAEVVGQKLRA 479

Query: 481 LGDRGQVLTVTHLPQVAAQGHQHLFVHKVRGSDATHTAVSKLNKSERVEEVARMLGGIDL 540
           LG R QVL VTHLPQVAAQGH HL V K    D+T T + +L+   R +E+ARMLGG+++
Sbjct: 480 LGARRQVLCVTHLPQVAAQGHAHLKVSKHSDGDSTRTRIERLDAGGRRDELARMLGGVEI 539

Query: 541 TKESLAHAKKMVVAAK 556
           T+E+ AHAK+M+  A+
Sbjct: 540 TRETRAHAKQMLDRAQ 555