Pairwise Alignments
Query, 557 a.a., recombination and repair protein from Pseudomonas simiae WCS417
Subject, 1162 a.a., Chromosome partition protein Smc from Pseudomonas putida KT2440
Score = 52.0 bits (123), Expect = 1e-10
Identities = 86/414 (20%), Positives = 164/414 (39%), Gaps = 47/414 (11%)
Query: 11 AIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDL 70
+ V+ + M+ + G G GKS ++DA+ +G+ + + G D++
Sbjct: 13 SFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNL--RGESMTDVIFNGSS 70
Query: 71 ADIPEAEAWLSERDLNNEGPCI----------LRRVITAEGRSRGYINGTPCPLGDL--- 117
P ++A + N+E + +RR +T +G++ Y+NGT C D+
Sbjct: 71 GRKPVSQASIELVFDNSETTLVGEYAAYAEISIRRKVTRDGQNSYYLNGTKCRRRDITDI 130
Query: 118 ---KALGELLIDIHSQHEHQSLL--KTDTHRRLLDEYAGATDLARQVQLAAQRWRQTRQE 172
LG I Q L+ K + R ++E AG + + + R R+T++
Sbjct: 131 FLGTGLGPRSYSIIEQGMISKLIEAKPEELRNFIEEAAGISKYKERRRETENRIRRTQEN 190
Query: 173 LERLSNSGDEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQVVE 232
L RL++ +E + + L Q + E E + E++ K +A + QV +
Sbjct: 191 LARLTDLREELERQLERLHRQAQAAEKY----REYKAQERQLKARLSALRWRDLDEQVRQ 246
Query: 233 QCSE-SDSGNVLNALTA-SLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDH 290
+ S D G AL A N +S+ E + Q + G++ R
Sbjct: 247 RESVIGDQGVSHEALVAEQRNADASIERLRDGHHELSERFNQVQGRFYSVAGDIARVEQS 306
Query: 291 FDADPARLQEIEE--------RLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDES 342
RL+++++ RL+T L + T + ++ TL A +E+
Sbjct: 307 IQHGQQRLRQLQDDFKEAERTRLETESHLGHDRTLLATLGEELAMLEPEQEMTLAAAEEA 366
Query: 343 IERLSGELASFARH-YQE----------KARELSDLRQQAATGLASAVELEIQR 385
L E A H +QE + R ++++Q L +++E + +R
Sbjct: 367 AAAL--EEAELGMHGWQEQWDSFNSRSAEPRRQAEVQQARLQQLETSLERQAER 418
Score = 43.5 bits (101), Expect = 5e-08
Identities = 96/427 (22%), Positives = 164/427 (38%), Gaps = 51/427 (11%)
Query: 117 LKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLAR----QVQLAAQRWRQTRQE 172
L+AL E +D+ Q E Q +T RL E + +R QV+L +R ++ E
Sbjct: 677 LQALREQQLDLEEQRE-QLRRRTQDENRLHGELKASLSASRARAEQVELRRRRLQEELSE 735
Query: 173 LERLSNSGDEQRA--RHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQV 230
LE EQRA QL +L E+L L + EQ EQ L RQ
Sbjct: 736 LE-------EQRALEHEQLGEARLLLQEALELMAQDTEQREQLMARRDTLRESLDRVRQE 788
Query: 231 VEQCSESDSGNVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGELNRFLDH 290
Q D + L RL S+ + S +A L ++ E +L+ L+
Sbjct: 789 ARQ--HKDHAHQLAV------RLGSLRAQHDSTRQALERLEQQAARLTERQEQLSLNLEE 840
Query: 291 FDADPARLQ-EIEERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNANDESIERLSGE 349
+A L+ ++EE L+ ++ + R+ + ++L D + ++ + L G+
Sbjct: 841 GEAPQEELRLKLEELLERRMSVDEEMRLARLHMDEADRELRDAEKRRTQAEQQAQLLRGQ 900
Query: 350 LASFARHYQEKARELSDLRQQAATGLASAVELEIQRLGMPGGRFTIELRTSASNELQPHG 409
L Q L++Q LA +L+ G T+E AS +
Sbjct: 901 LEQLRLECQGLDVRRKTLQEQL---LADGYDLQ-------GVLATLE--AEASEQGTEQE 948
Query: 410 LEQVELLVSANPGQPLKALAKVASGGE---------------LSRISLAIQVITAQTSRV 454
LEQ+E + L A+ + E L + I+ I +T
Sbjct: 949 LEQLEARIQRLGAINLAAIEEYEQQSERKRYLDAQDADLVEALETLENVIRKIDKETRNR 1008
Query: 455 PTLVFDEVDVGIGGPTAEIVGQLLRRLGDRGQVLTVTHLPQVA-AQGHQHLFVHKVRGSD 513
FD+++ G+ ++ G L G+ L T + +A G ++ +H + G +
Sbjct: 1009 FKDTFDQINAGLQALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGE 1068
Query: 514 ATHTAVS 520
TA++
Sbjct: 1069 KALTALA 1075
Score = 42.7 bits (99), Expect = 8e-08
Identities = 71/338 (21%), Positives = 126/338 (37%), Gaps = 81/338 (23%)
Query: 158 QVQLAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEEL--ESLGLGETELEQLEQEHK 215
+++LA + +EL + + QLL QLE+L E GL ++ + + +
Sbjct: 865 EMRLARLHMDEADRELRDAEKRRTQAEQQAQLLRGQLEQLRLECQGL---DVRRKTLQEQ 921
Query: 216 NLTNAETLLGICRQVVEQCSESDSGNVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQI 275
L + L G+ + + SE + L L A + RL ++N A I
Sbjct: 922 LLADGYDLQGVLATLEAEASEQGTEQELEQLEARIQRLGAINL--------------AAI 967
Query: 276 QVEEAVGELNRFLDHFDADPARLQEIEERLDTIYTLARKHRIQPTEVATMQQKLLDEIET 335
+ E E R+LD DAD + E L+T+ + RK +D+ ET
Sbjct: 968 EEYEQQSERKRYLDAQDAD------LVEALETLENVIRK---------------IDK-ET 1005
Query: 336 LNANDESIERLSGEL-ASFARHYQEKARELSDLRQQAATGLASAVELEIQRLGMPGGRFT 394
N ++ ++++ L A F + + GG
Sbjct: 1006 RNRFKDTFDQINAGLQALFPKVFG-------------------------------GG--- 1031
Query: 395 IELRTSASNELQPHGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRV 454
SA EL L + + A P + + SGGE + +LA+ + +
Sbjct: 1032 -----SAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPA 1086
Query: 455 PTLVFDEVDVGIGGPTAEIVGQLLRRLGDRGQVLTVTH 492
P + DEVD + +L++ + + Q + +TH
Sbjct: 1087 PFCMLDEVDAPLDDANVGRYARLVKEMSESVQFIYITH 1124
Score = 36.6 bits (83), Expect = 6e-06
Identities = 48/207 (23%), Positives = 80/207 (38%), Gaps = 31/207 (14%)
Query: 171 QELERLSNSGDEQRARHQLLSYQLEELESLGLGETELEQLEQEHKNLTNAETLLGICRQV 230
QE+ERL EQ A + L QL+ L L +LE+ ++ + T E L
Sbjct: 654 QEIERLGQEQLEQEAALEQLDQQLQALREQQL---DLEEQREQLRRRTQDENRL------ 704
Query: 231 VEQCSESDSGNVLNALTASLNRLSSVNSGSGSLSEATTLLTSAQIQVEEAVGE----LNR 286
G + +L+AS R V L E + L + E +GE L
Sbjct: 705 --------HGELKASLSASRARAEQVELRRRRLQEELSELEEQRALEHEQLGEARLLLQE 756
Query: 287 FLDHFDADP-------ARLQEIEERLDTIYTLARKHRIQPTEVATMQQKLLDEIETLNAN 339
L+ D AR + E LD + AR+H+ ++A L + ++
Sbjct: 757 ALELMAQDTEQREQLMARRDTLRESLDRVRQEARQHKDHAHQLAVRLGSLRAQHDSTR-- 814
Query: 340 DESIERLSGELASFARHYQEKARELSD 366
+++ERL + A ++ + L +
Sbjct: 815 -QALERLEQQAARLTERQEQLSLNLEE 840