Pairwise Alignments

Query, 374 a.a., molecular chaperone DnaJ from Pseudomonas simiae WCS417

Subject, 224 a.a., DnaJ-class molecular chaperone CbpA from Sphingobium sp. HT1-2

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 7   YEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDNKESEEMFKEANEAYECLCDPNKRAAY 66
           YE LGV   +S  +++KAYR+LA K HPD NP +K +E+ FK+   AY+ L D +KR  Y
Sbjct: 5   YEKLGVAPSASAEEIQKAYRKLAKKLHPDLNPGDKAAEDKFKDVAGAYDLLSDADKRRRY 64

Query: 67  D----------------QYGHAGVD---PSMGGGGAGFGGQNFSDIFGDVFSDFFGGGRG 107
           D                   +AG D    +   G A FGG +      DVF+D F   R 
Sbjct: 65  DAGEIDETGAERPPQQFYRDYAGSDFGRYASDAGYADFGGND------DVFADLF--RRN 116

Query: 108 GQRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVP 141
            +    +RG DL Y L ++  ++V G S  + +P
Sbjct: 117 AEARANRRGQDLLYRLAISFADSVTGVSQRLTLP 150



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 213 TLAVKVPAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPIS 272
           TL V +P G+  G  +RL G+G AG   G  GD  + I V+  + F RDG  +  ++PIS
Sbjct: 154 TLDVTIPPGILDGQTLRLKGKGAAGMGKGGPGDALIEIEVKPDARFTRDGDDITIDLPIS 213



 Score = 43.9 bits (102), Expect = 4e-09
 Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 220 AGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPISFVDAALG 279
           AG D G     +G  + G       DL+        +   R G+ L   + ISF D+  G
Sbjct: 86  AGSDFGRYASDAGYADFGGNDDVFADLF---RRNAEARANRRGQDLLYRLAISFADSVTG 142

Query: 280 --GELEIPTLDGRVKLKIPEGTQTGKQFRIRGKGVAPVRGGGAGDLMCRVAVETPVNLNR 337
               L +P   G + + IP G   G+  R++GKG A +  GG GD +  + V+      R
Sbjct: 143 VSQRLTLPG-GGTLDVTIPPGILDGQTLRLKGKGAAGMGKGGPGDALIEIEVKPDARFTR 201