Pairwise Alignments

Query, 378 a.a., carbamoyl phosphate synthase small subunit from Pseudomonas simiae WCS417

Subject, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

 Score =  363 bits (932), Expect = e-105
 Identities = 193/381 (50%), Positives = 244/381 (64%), Gaps = 8/381 (2%)

Query: 5   AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
           A+L LADG++  G  IGA G+   EV FNTA+TGY+EILTDPSY  QIVT T+PHIGN G
Sbjct: 14  AMLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIGNVG 73

Query: 65  TTPEDVE----SDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTR 120
           T  ED+E    + R  + G++ +      SN+R    L  +LKA  V+ + GIDTR LT 
Sbjct: 74  TNEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRALTA 133

Query: 121 ILREKGSQNGCIMVGDN--ISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTVWDLK 178
            +RE G+ N  I    N     EA  A A+ + GL G+DLA   +  +   W  T W + 
Sbjct: 134 WIRENGAPNAVIAHDPNGVFDIEALKAEAKAWSGLVGLDLAIEATSGQSSTWTETPW-VW 192

Query: 179 TDSHATIDAADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFL 238
              + T+  AD  YHVV  D+GVK NILR+     C+VTVVPAQT A D+LAL+PDGVFL
Sbjct: 193 NKGYGTLGEADAKYHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAEDILALKPDGVFL 252

Query: 239 SNGPGDPEPC-DYAIQAIKDVLETEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPV 297
           SNGPGDP    +YA+  I++++++E+P+FGICLGHQ+L LA GAKT KM  GHHGANHPV
Sbjct: 253 SNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEKMHQGHHGANHPV 312

Query: 298 QDLDTGVVMITSQNHGFAVDEATLPSNVRAIHKSLFDGSLQGIERTDKSAFSFQGHPEAS 357
           +D  TG V I S NHGFAVD  +LP  V   H SLFDG+  G+    K  FS Q HPEAS
Sbjct: 313 KDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVFSVQHHPEAS 372

Query: 358 PGPNDVAPLFDRFINEMAKRR 378
           PGP D   LF RF+N + + +
Sbjct: 373 PGPQDSHYLFRRFVNLLRENK 393