Pairwise Alignments

Query, 1073 a.a., carbamoyl phosphate synthase large subunit from Pseudomonas simiae WCS417

Subject, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 18/259 (6%)

Query: 623 EDVLEIVRVEK-PKGVIVQYG-GQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQM 680
           +D +  ++ EK  +  I+ +G G     +   LE AG+P  G+   A   A D+ R +Q+
Sbjct: 59  DDFIARLQAEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQV 118

Query: 681 VERLNLRQPPNATVRSEDEAIRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDA 740
              L +  P ++ + SED+ I AA ++G PL+V+P++      M  V    E    L DA
Sbjct: 119 WHSLGIPTPRHSVLCSEDDCISAAKELGLPLIVKPAHEGSSIGMAKVNSAAE----LIDA 174

Query: 741 VKVSN--DSPVLLDHFLNCAIEMDVDAVCDG---TDVVIGAIMQHIEQAGVHSGDSACSL 795
            K ++  DS VL++ ++    E  + A   G     + +G      +    +        
Sbjct: 175 WKAASTYDSQVLVEQWIQ-GPEYTI-ATLRGQVLPPIALGTPHTFYDYDAKYLASDTQYR 232

Query: 796 PPYSLPAHIQDEMREQVKKMALELGVVGLMNVQLALQGE-DIYVIEVNPRASRT----VP 850
            P  L A  + E+ +   K    LG+ G     +    + D + +EVN     T    VP
Sbjct: 233 IPCGLDASKEQELMDLTAKACEALGIAGWARADVMQDDQGDFWFLEVNTAPGMTDHSLVP 292

Query: 851 FVSKCIGVSLAMIAARVMA 869
             ++  G+    +   ++A
Sbjct: 293 MAARAAGLDFQQLVLAILA 311



 Score = 38.9 bits (89), Expect = 6e-07
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 101 DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLE 160
           D   +G+LE  G+   G+       A D+ R  +   S+G+  PR  +  S ++  +  +
Sbjct: 84  DGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWHSLGIPTPRHSVLCSEDDCISAAK 143

Query: 161 TLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEV 220
            LG P I++P+    G+  G+A      E I A     +   ++L+++ + G  EY +  
Sbjct: 144 ELGLPLIVKPAHE--GSSIGMAKVNSAAELIDAWKAASTYDSQVLVEQWIQG-PEYTIAT 200

Query: 221 VR 222
           +R
Sbjct: 201 LR 202