Pairwise Alignments

Query, 1073 a.a., carbamoyl phosphate synthase large subunit from Pseudomonas simiae WCS417

Subject, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

 Score = 1237 bits (3200), Expect = 0.0
 Identities = 663/1147 (57%), Positives = 810/1147 (70%), Gaps = 95/1147 (8%)

Query: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60
            MPKR DIKSILI+GAGPIVIGQACEFDYSG QACKAL+EEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA 120
            ADATY+EPI  + VAKII KERPDALLPTMGGQTALN AL L+R GVL+++ VEMIGA  
Sbjct: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP 120

Query: 121  DTID-----------------------------------KAEDRSRFDKAMKSIGLACPR 145
            + ID                                   K  + +R +   K  G    +
Sbjct: 121  EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK 180

Query: 146  S------------------GIAHSMEEANAVLETLGFPCIIRPSFTMGGTGGGIAYNREE 187
            +                   I+H+M  A   ++ +G P IIRPSFTMGGTGGGIAYNR E
Sbjct: 181  ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE 240

Query: 188  FEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDS 247
            F EI   GLD SPT E+LI+ES++GWKEYEMEVVRDK DNCII+CSIEN DPMGVHTGDS
Sbjct: 241  FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300

Query: 248  ITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNPRVSRS 307
            ITVAPA TLTDKEYQ++RNAS+AVLREIGVETGGSNVQF + P  GR+VVIEMNPRVSRS
Sbjct: 301  ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS 360

Query: 308  SALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKF 367
            SALASKATGFPIAKVAAKLA+GYTLDEL NDITGG TPASFEPSIDYVVTK+PRFAFEKF
Sbjct: 361  SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420

Query: 368  AKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDEKLDLSNPE----SMSV 423
              A   LTT MKSVGEVMAIGRTF ESLQKALRG+E G+ GLDE +++   E    S + 
Sbjct: 421  PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDE-IEIPGYEEGEGSKNA 479

Query: 424  LKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLGLAS 483
            ++  +  P  +R+  VA A R GM+ E++   + IDPWF+ Q++ ++  E +++  GL  
Sbjct: 480  IRAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHGLPQ 539

Query: 484  IDRDMMFRLKRKGFSDQRLAKLLGVTEKNLRTHRHKLEIFPVYKRVDTCAAEFSTDTAYL 543
             D + +  LK  GFSD RLA L     K +   R+ L + PV+KR+DTCAAEF++ TAY+
Sbjct: 540  -DAENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYM 598

Query: 544  YSTYE------EECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIM 597
            YSTYE         EA  S R K++ILGGGPNRIGQGIEFDYCC HAA AL++ G+E IM
Sbjct: 599  YSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIM 658

Query: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPK----GVIVQYGGQTPLKLARAL 653
            +NCNPETVSTDYDTSDRLYFEP+T EDV+EI+R E+ K    GVIVQ+GGQTPLKLA AL
Sbjct: 659  INCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEAL 718

Query: 654  EAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAASKIGYPLVV 713
            E  G+PI+GT+PD ID AEDR+RFQ+++ +L+L QP N    S ++A   AS+IG+PLVV
Sbjct: 719  EKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVV 778

Query: 714  RPSYVLGGRAMEIVYEEEELKRYLRDAV----------KVSND-----------SPVLLD 752
            RPSYVLGGRAM+I++ E +L+ YL D V          +  ND           +P+L D
Sbjct: 779  RPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFD 838

Query: 753  HFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQV 812
             +L  A+E+DVDA+CDG +V +  IM+HIE+AG+HSGDSACSLP  SL     DE+  Q 
Sbjct: 839  SYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQT 898

Query: 813  KKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKT 872
              +A  L V GLMNVQ A++   IYV+EVNPRASRTVPFV+K IG  +A IAARVMAG+ 
Sbjct: 899  TALAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEK 958

Query: 873  LKE--IGFTKEIIP---NFYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAF 927
            L      + ++  P      +VKEAVFPFA+FPGVD +LGPEM+STGEV+G+   F  AF
Sbjct: 959  LDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAF 1018

Query: 928  AKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKV 987
            AK+Q+GA   LP  GT F+SVRD+DK  V    R L+  GF+V+AT GT + +   G+  
Sbjct: 1019 AKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGINA 1078

Query: 988  RRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGE 1047
             ++NKV EGRPH+ D I+N +V L+INTT+  ++I+DS S+RR  L  K+   TT+A  E
Sbjct: 1079 EKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAE 1138

Query: 1048 AICEALK 1054
            A   A+K
Sbjct: 1139 AAALAIK 1145