Pairwise Alignments

Query, 305 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 305 a.a., tRNA pseudouridine 55 synthase from Pseudomonas putida KT2440

 Score =  548 bits (1413), Expect = e-161
 Identities = 275/305 (90%), Positives = 286/305 (93%)

Query: 1   MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG 60
           MAQVKRIRRNVSGIILLDKP+GFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
Sbjct: 1   MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG 60

Query: 61  EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAVLPGFRGEIS 120
           EATKFSQYLLDSDKGYET+MQ+G+TT T DAEG+VLQ RDVTVGRADIEAVLP FRG IS
Sbjct: 61  EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTRDVTVGRADIEAVLPRFRGPIS 120

Query: 121 QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI 180
           QIPPMYSALKRDGQPLYKLARAGEVVERE RSVTI RLELL CEG  ARL+V CSKGTYI
Sbjct: 121 QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI 180

Query: 181 RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS 240
           RTLVEDIGE LGCGAYVAELRRTQAGPF+LAQTVTLEELE  HAEGGNEA+DRFLMPSDS
Sbjct: 181 RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS 240

Query: 241 GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR 300
           GL DWPL+  SEHSAFYWL+GQ VRAPDAP+FGMVRVQDHN RFIGIGEVSEDGRIAPRR
Sbjct: 241 GLQDWPLVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR 300

Query: 301 LIRSE 305
           LIRSE
Sbjct: 301 LIRSE 305