Pairwise Alignments

Query, 701 a.a., polynucleotide phosphorylase/polyadenylase from Pseudomonas simiae WCS417

Subject, 791 a.a., Transcription accessory protein (S1 RNA-binding domain) from Variovorax sp. SCN45

 Score = 58.2 bits (139), Expect = 2e-12
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 618 AEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLV 677
           A+ + G I  G V  +  FGAFV++   +DGLVH+S LS   V    +++K G  V+V V
Sbjct: 666 ADLKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVKV 725

Query: 678 LDVD-NRGRIKLSIK-DVAAAKASG 700
           ++VD  R RI LS+K D A A+  G
Sbjct: 726 MEVDVARKRIGLSMKLDAAPARRDG 750