Pairwise Alignments

Query, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

 Score =  287 bits (735), Expect = 5e-82
 Identities = 162/384 (42%), Positives = 231/384 (60%), Gaps = 17/384 (4%)

Query: 4   ILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPGTEL 63
           + IV+D+  IR  L + L++         S      R +    D+I+SD+R+PGA G +L
Sbjct: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDL 66

Query: 64  I----KLGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQSP 119
           +    +     PV+IMT+++ L SAV S + GA +Y+ KPFD DE   AVA + R  Q  
Sbjct: 67  LARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDE---AVALVKRANQHA 123

Query: 120 SSAPAEQRPAGKAADKPGVDNSNGEIGIIGSCPPMQDLYGKIRKVAPTDSNVLIQGESGT 179
                ++ P                  IIG  P MQ+++  I +++ ++  VLI GESGT
Sbjct: 124 QEQQNQEAPPALTRTPE----------IIGEAPAMQEVFRAIGRLSHSNITVLINGESGT 173

Query: 180 GKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAAD 239
           GKELVA ALH  S RA +P I++N AAIP+ L+ESELFGHEKGAFTGA+  R G  E AD
Sbjct: 174 GKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQAD 233

Query: 240 GGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQ 299
           GGTLFLDEIG++P + Q RLLRVL +GE  RVG     KVDVR+IAATH++L++L   G+
Sbjct: 234 GGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGK 293

Query: 300 FREDLYYRLHVIALKLPALRERGADVNEIAHAFLLRQSARINRTDLKFAPDAEQAIRHYS 359
           FREDL++RL+VI + +P + +R  D+  +A  FL R +  +         + E+ +++  
Sbjct: 294 FREDLFHRLNVIRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLP 353

Query: 360 WPGNVRELENAVERAVILSESPEI 383
           WPGNVR+LEN      +++   E+
Sbjct: 354 WPGNVRQLENTCRWITVMASGREV 377