Pairwise Alignments

Query, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  330 bits (847), Expect = 5e-95
 Identities = 197/462 (42%), Positives = 274/462 (59%), Gaps = 32/462 (6%)

Query: 4   ILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPGTEL 63
           IL+V+D+    + L+ LL    Y V+ A S ++A E+     FDL++ D+R+    G   
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 64  IK----LGQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQSP 119
           +K    L    PVLIMT+Y+S+ +AV+++K GA+DY+ KP D D +   + + L    S 
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSI 127

Query: 120 SSAPAEQRPAGKAADKPGVDNSNGEIGIIGSCPPMQDLYGKIRKVAPTDSNVLIQGESGT 179
                        A+ P V  S  + G++G  P MQ L  +I  VAP+++ VLI G+SGT
Sbjct: 128 D------------AETPAVTAS--QFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGT 173

Query: 180 GKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAAD 239
           GKELVARA+H  S R++ P++++NCAA+ ESL+ESELFGHEKGAFTGA   R G    AD
Sbjct: 174 GKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEAD 233

Query: 240 GGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQ 299
           GGTLFLDEIG++    Q RLLR +QE E++RVGS Q   VDVRLIAATHRDL +    G+
Sbjct: 234 GGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGR 293

Query: 300 FREDLYYRLHVIALKLPALRERGADVNEIAHAFLLRQSARINRTDLKFAPDAEQAIRHYS 359
           FR+DLYYRL+V+A+++P+LR+R  D+  +A  FL R + R  +    F P A   + HY 
Sbjct: 294 FRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYD 353

Query: 360 WPGNVRELENAVERAVILSESPEISAELLGIDIELSDLEDDDFIGLAPSQGGSNTSHEPT 419
           WPGN+RELENAVERAV+L     IS   L +            I   P   G +   +P 
Sbjct: 354 WPGNIRELENAVERAVVLLTGEYISERELPL-----------AIASTPIPLGQSQDIQPL 402

Query: 420 EDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQR 461
            ++  E          +    +TE AR+LG++RK L  +  R
Sbjct: 403 VEVEKEVILAAL---EKTGGNKTEAARQLGITRKTLLAKLSR 441