Pairwise Alignments

Query, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 765 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 2e-42
 Identities = 160/597 (26%), Positives = 265/597 (44%), Gaps = 65/597 (10%)

Query: 168 RILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQL 227
           R+ + L+++ P L+E L+  EDR+FY H G++P ++ RA     SGG+  QGGSTL+ QL
Sbjct: 59  RLWLPLERISPSLVEALLLKEDRNFYWHPGINPPALVRAAMATYSGGQR-QGGSTLSMQL 117

Query: 228 VKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQ 287
            +  +  N R +  KL +  +A+ LE  YSK +ILEAYLN   +G +    + G   AS+
Sbjct: 118 ARRLWDLNTRQVPGKLQQMALALWLEARYSKHDILEAYLNLAPMGGN----IEGAEAASR 173

Query: 288 FFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVA 347
            +FG+  ++L L + AL + ++        R  P     R+ L+ D  E           
Sbjct: 174 IYFGKSAAQLSLSE-ALALAVIPQQPGRRARFGPSLQHARQRLMADWRETYPQDPRND-- 230

Query: 348 AAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAE 407
           +   +PL    R ++     P     +  QL         ++ G  + ++ +  LQ   E
Sbjct: 231 SLLDLPLEARNRQQI-----PFLAPHLSEQLL-------ASQPGNELNSTLNLPLQHLLE 278

Query: 408 ASVNDTFKRLTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAV---RPI 464
             ++     +  R+ +    A  ++ +     V+A++GS        +  ++ V   R  
Sbjct: 279 RLISGF---IAERRSTGVENATAILIDSRDQSVKALVGSADYLSTRLHGQVNGVLSRRSP 335

Query: 465 GSLVKPAVYLTALEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIA 524
           GS +KP +Y  AL++   + + S L D P      +   + P+NFD    G +     + 
Sbjct: 336 GSTLKPFLYGLALDQGVIHPM-SILKDLP-----SNFGYFQPENFDGSFVGPLTARDALI 389

Query: 525 HSYNISTSRLGLEVGVPNVLKTIARLGV---TREFPAFPSILLGAGAMTPMEVATMYQTL 581
            S NI    L  +V  P++   + R G+     E     ++ LG G MTP E+A +Y  L
Sbjct: 390 RSRNIPAVWLASQVKSPSLYGLLQRAGIKGLRDESHYGLALALGGGEMTPEELARLYVML 449

Query: 582 ANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYS 641
           A  G   P+R ++    + G           Q     + +++++ ++R  R         
Sbjct: 450 AGDGHLRPLRYLQEQPQSTG----------AQLLTPQAAFMVRDMLRRNPRP-------D 492

Query: 642 VLPA-NLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTP-FTGATGALQVWTS 699
            LP  +   A KTGTS    D+W AG     + VVW+G  D    P F GA  A  +   
Sbjct: 493 GLPGRHWRTAWKTGTSWGFHDAWSAGLVGPYVLVVWVGNFDGRPNPAFIGAKTAAPL--- 549

Query: 700 FMRKADPLPLNMPQ--------PDNIVQAWIDPHTGQGSDANCPGAVQMPYIRGSEP 748
           F R AD LPL +P         P  +V+  +   +G+  +  CP   +  YI G  P
Sbjct: 550 FFRIADALPLALPNVVIKADKPPAGLVRIDVCAASGELPNRWCPQTRKTWYIPGVSP 606