Pairwise Alignments

Query, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 852 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Dickeya dianthicola ME23

 Score =  167 bits (422), Expect = 3e-45
 Identities = 92/262 (35%), Positives = 153/262 (58%), Gaps = 8/262 (3%)

Query: 168 RILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQL 227
           RI +KLDQ+PP L+   +A ED  F+ H GV P+ I RA  +  + G  +QG ST+TQQL
Sbjct: 66  RIPLKLDQIPPTLVNAFIATEDSRFFEHHGVDPQGIIRAAMIALTSGHASQGASTITQQL 125

Query: 228 VKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQ 287
            +NF+L+ ER+L RK+ E  +A+ +E   +K+EILE YLN++++G       +G G A+Q
Sbjct: 126 ARNFFLSPERTLLRKIKEVFLAIRIEQTLTKEEILELYLNKIYLGY----RAYGVGAAAQ 181

Query: 288 FFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVA 347
            +FG+P+ +L L Q+A++ G+ K PS +NP  + +RA+ RRN+VL  +  +   T  Q  
Sbjct: 182 VYFGRPVEQLTLAQMAMIAGLPKAPSTFNPLYSYDRAVARRNVVLSRMLDENYITQAQYD 241

Query: 348 AAKKMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAE 407
            A+   L           S     ++V++++ + Y  ED   +G +++T+    LQ  AE
Sbjct: 242 QARNEKLVADYHAPEIAFSASYLAEMVRQEMVKRY-GEDAYNDGYQVYTTITRKLQQAAE 300

Query: 408 ASVND---TFKRLTGRKGSDEV 426
            +V++    +    G +G ++V
Sbjct: 301 DAVHNNVIAYDMRHGYRGPEQV 322



 Score = 87.0 bits (214), Expect = 4e-21
 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 4/179 (2%)

Query: 425 EVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYT 484
           +V +A+V  NP+ G V A++G    + + FNRA  A+R +GS +KP +Y  A++K    T
Sbjct: 424 DVNSALVSLNPKDGAVLALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDK--GLT 481

Query: 485 LTSWLSDDPLS-VKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPNV 543
           L + L+D P++    G G  W+P+N      G + L QG+  S N+   R    +GV   
Sbjct: 482 LATILNDAPITRWDPGAGSDWSPKNSPPEYDGQIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 544 LKTIARLGVTRE-FPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAEG 601
              + R G   +      S+ LG+ + TP++V   Y  + NGG+      I  +  A G
Sbjct: 542 ADYLERFGFPEQNIVHTESLALGSASFTPLQVVRGYAVMTNGGYLVDPYFITKIDNASG 600



 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 22/134 (16%)

Query: 634 GTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDN----GKTPFT- 688
           GTG     VL     + GKTGT+N+S+D+WF+G+G +++A VW+G DD+    G+T  + 
Sbjct: 698 GTGWRAGKVLQRR-DIGGKTGTTNNSKDAWFSGYGPNIVASVWIGFDDHRRDLGRTSTSG 756

Query: 689 -----------GATGALQVWTSFMRKA---DPLPLNMPQPDNIVQAWIDPHTGQGSDANC 734
                      GA  A   W  FM+ A    P     P P  +V   ID  +G+ SD   
Sbjct: 757 VIRDQISGYEGGAKSAEPAWDDFMKVALAGVPEQKTSP-PQGVVTVTIDRSSGKLSDGGA 815

Query: 735 PGAVQMPYIRGSEP 748
             + Q  +I G++P
Sbjct: 816 -NSRQEFFIDGTQP 828