Pairwise Alignments

Query, 1224 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas simiae WCS417

Subject, 1224 a.a., Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease from Pseudomonas putida KT2440

 Score = 1675 bits (4337), Expect = 0.0
 Identities = 844/1216 (69%), Positives = 963/1216 (79%), Gaps = 15/1216 (1%)

Query: 4    KPLALAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDESSFGRELLPPQILVVTFT 63
            +PLAL+FPL GSQLIEASAGTGKTFTISALYLRL+LGHGG E  F RELLPPQILVVTFT
Sbjct: 5    RPLALSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGG-EQGFERELLPPQILVVTFT 63

Query: 64   DAATKELRERIRIRLAEAARFFREEIEQPDALIADLRADYLPEQWPACANRLDIAAQWMD 123
            DAATKELRERIR RLAEAARFFR E+E  D L+  LR DY  E WP CA RL+IA QWMD
Sbjct: 64   DAATKELRERIRARLAEAARFFRGELEGADPLLHQLRDDYPQENWPRCAGRLEIAVQWMD 123

Query: 124  EAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHDDALNW 183
            EAAVSTIH WCQRMLREHAFDSGSLFTQTLETDHS+LLG+V+RDYWR FCY M  DAL W
Sbjct: 124  EAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSELLGQVMRDYWRRFCYGMQGDALAW 183

Query: 184  VRSHWGGPAALMPRVRALFGSERPTDETREPAELITACLQERREALTTLKAPWQQWATEL 243
            VR +WG P AL+PR+R LFG  R      EPA LI A LQ+R   L  +KAPW QWA EL
Sbjct: 184  VRGNWGSPDALLPRIRPLFGRVRAQQNGPEPAALIQASLQQRGAQLARIKAPWAQWAEEL 243

Query: 244  RDICLQAVAAKAVDGRKMQARYFEPWFEKISAWAADETLEQLDIGTGFTRLTPDGMAEAW 303
            R IC  A+AAK VDGRKMQARYFEPWF+K+ AWA+DE L +LD+GTGFTRLTP GMAEAW
Sbjct: 244  RQICRDALAAKQVDGRKMQARYFEPWFDKLCAWASDEQLVELDLGTGFTRLTPAGMAEAW 303

Query: 304  KGEPPQHPGIDAMAGLKAALDALPTPDAAVLQHAAGWVGKRFEEEKRRRAEMGFDDMLIR 363
            KGEPP+HP ++AM  L+  L AL +PDA +L+HAA WV  RFE EKRRRAEMGFDDML+R
Sbjct: 304  KGEPPEHPALNAMQHLQQQLQALDSPDAPLLEHAASWVSARFEVEKRRRAEMGFDDMLVR 363

Query: 364  LNAALQADGGERLASVVREQFPVALIDEFQDTDPVQYSIFDSIYRIEENHLDSGLFLIGD 423
            L  AL ++ GERLAS++REQFPVALIDEFQDTDPVQY IF+ IY+I EN  ++GLF+IGD
Sbjct: 364  LQHALASEAGERLASLIREQFPVALIDEFQDTDPVQYGIFERIYQISENRAETGLFMIGD 423

Query: 424  PKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVNHVFQRA---ETGRGA 480
            PKQAIYAFRGADIYTYL AR++T+GR H+L TN+RSS AMV AVN VF +A   E GRGA
Sbjct: 424  PKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVAAVNQVFLQAEAREAGRGA 483

Query: 481  FLFREPDGVNPVPFHSVLSQGRKEQLQVDGQTLPAMNLWHLPTDQPVSNVIYRQQLAAAC 540
            FLFRE D  NP+PF  V ++GR EQL +DG+   A+  W L +++PVS+ +YRQQ+AA+C
Sbjct: 484  FLFREADD-NPLPFIEVRAKGRGEQLLIDGEVSAALQCWQLESEEPVSSSVYRQQMAASC 542

Query: 541  ATHIVELLNGGQQGSAGFLQPDGSFKGVRPSDIAILVRDGKEAQAVRGELAARGVRSVYL 600
            A+HIV LLNGGQQG++GF   +G  +   PSDIAILVRDG EAQ VR ELAAR VRSVYL
Sbjct: 543  ASHIVALLNGGQQGTSGFRNAEGELRACLPSDIAILVRDGHEAQMVRAELAAREVRSVYL 602

Query: 601  SDKDSVFAAQEAHDLLAWLKACAEPDVERPLRAALACVTLNLSLAELERLNQDELAWESR 660
            SDKDSVFAAQEAHDLLAWLKACAEPD ER L+AALA +TL LSLA L+RLNQDE  WES 
Sbjct: 603  SDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLGLSLAALDRLNQDERVWESW 662

Query: 661  VMQFRGYRTIWRTQGVLPMLRRLLHDFKLPQTLIARSDGERVLTNLLHLSELLQQAASEL 720
            VM+FR YR  W+ QGVLPMLR LLHDF+LP+TLI RSDGERVLTNLLHL+ELLQQAA EL
Sbjct: 663  VMRFRLYRDTWQRQGVLPMLRHLLHDFQLPRTLIRRSDGERVLTNLLHLAELLQQAAGEL 722

Query: 721  DGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYDLVFLPFICSAK 780
            DGEQALIRHLAEHLA SGQAGEEQILRLESDEQLVKVVTIHKSKGLEY LV+LPFIC++K
Sbjct: 723  DGEQALIRHLAEHLASSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFICTSK 782

Query: 781  PVDGSRLPLHYHDENGKSHVSLRPTPELIAQADNERLAEDLRLFYVALTRAKHACWLGIA 840
            PVDGSRLPL +HD  G +H++L P  E I +AD+ERLAEDLRL YVALTRA+HACWLG+A
Sbjct: 783  PVDGSRLPLAWHDSEGNAHLTLTPDQEQIERADDERLAEDLRLLYVALTRAQHACWLGVA 842

Query: 841  DLKRGNSNNSVLHLSALGYLLGAGASLGESAGLARWLLDLQEGCTAIHYGQVPEAQDNLF 900
            DLKRGN  +S LH SA GYLLG G +L  SA L  WL  L   C  I    +P+A + ++
Sbjct: 843  DLKRGNLKSSQLHRSAFGYLLGGGLALAGSAQLTDWLQALAASCPHITCPGLPQADEQMY 902

Query: 901  HPPRNEATLRAPLLPKRKAAENWWIASYSALRIGDSMSAATLEAPESPQAQKLFDDERLD 960
              P  E  L     P+  AAE+WWIASYSALR+GD    A     +S QAQ+L DDE  D
Sbjct: 903  RMPHAERELLPARRPRHAAAEHWWIASYSALRVGDQTLGA-----DSSQAQQLLDDEVPD 957

Query: 961  PDAPREVAASGGDIHRFPRGPNPGTFLHGLLEWAGEDGF---NVTPEAIEKAVGARCNRR 1017
                REV A  GDIHRFPRGPNPGTFLHGLLEWAG +GF   +  P+ IE+ VG RCNRR
Sbjct: 958  AQVLREVPADSGDIHRFPRGPNPGTFLHGLLEWAGREGFSEVSANPQLIERTVGQRCNRR 1017

Query: 1018 NWEGWIITLSSWLGHLLQ--TPLPVNNSHVSLSGLQQYQIEMEFWFASHKVDVLALDKLV 1075
            +W GWI TLS W+  LL    PLP ++  V+L  L+ YQIEMEFWFASH+VD   LD+LV
Sbjct: 1018 DWAGWIPTLSHWMQRLLSEALPLPGSDQSVTLGQLRHYQIEMEFWFASHRVDAEQLDRLV 1077

Query: 1076 CQYTHNGVSRVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNWLGPDDSAYTFDAMEQ 1135
             ++TH G++R AA+P +LNGMFKGFIDL FE DGRYYV DYKSNWLG D  AY   AME+
Sbjct: 1078 ARHTHPGLARPAAQPTVLNGMFKGFIDLAFELDGRYYVTDYKSNWLGADIQAYDAMAMEK 1137

Query: 1136 SILDHRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYIFLRGTQSASQGAYFTRPPR 1195
            +IL+HRYDLQYVLYLLALHRQL+ARL DYDYDRHVGGAL+IFLRG  S+  G Y  +PPR
Sbjct: 1138 AILEHRYDLQYVLYLLALHRQLRARLADYDYDRHVGGALFIFLRGASSSGHGVYHAKPPR 1197

Query: 1196 ELIEGLDLLFQGKPIP 1211
            ELIE LD LF+G+  P
Sbjct: 1198 ELIESLDALFRGEHAP 1213