Pairwise Alignments

Query, 1224 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas simiae WCS417

Subject, 1117 a.a., ATP-dependent DNA helicase pcrA (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 64.7 bits (156), Expect = 4e-14
 Identities = 132/505 (26%), Positives = 196/505 (38%), Gaps = 84/505 (16%)

Query: 7   ALAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDESSFGRELLPPQILVVTFTDAA 66
           ALA     S  +EA AG GKT+ + +  LR +L              P  IL +TFT  A
Sbjct: 20  ALACDPARSIAVEACAGAGKTWMLVSRILRALLDG----------CAPQDILAITFTKKA 69

Query: 67  TKELRERIRIRLAEAARFFREEIEQPDALIADLRADYLPEQWPACANRLDIAAQWMDEAA 126
             E+R+R+   L   A          DAL  +LR   L E   A A R    A+ + E  
Sbjct: 70  AGEMRDRLNAELRRWAGL------SDDALAIELRVRGLGE---ADARRRVPEARSLYERV 120

Query: 127 --------VSTIHSWCQRMLREHAFD-----SGSLFTQTLETDHSDLLGEVLRDYWRLFC 173
                   V T HSW   +LR             +  + LE D   +     R Y  L  
Sbjct: 121 TAIGRPVQVRTFHSWFAALLRGAPLSVLQELQLPVQYELLEDDARAVAQVWPRFYAALAT 180

Query: 174 YPMH-DDALNWVRSHWGGPA------ALMPRVR-ALFGSERPTDETREPAELITACLQER 225
            P    D ++ V  H           AL  RV  AL  +    D + +P +       +R
Sbjct: 181 NPAERQDFMDSVAEHGRHQTLKALEKALQKRVEFALADAAGVVDASVDPVD-------QR 233

Query: 226 REALTTLKAPWQQWATELRDICLQAVAAKAVDGRKMQARYFEPWFEKISAWAADETLEQL 285
                    P +    + R + L   AA+A+ GR     +     E       ++ L Q 
Sbjct: 234 YPEYAGFDDPVRWLVQDARALTLLREAAQAL-GRASAVTFSAKGVE------LEQALGQA 286

Query: 286 DIGTGFTRLTPDGMAEAWKGEPPQHPGIDAMAGLKAALDALPTPDAAVLQHAAGWVGKRF 345
           D G G          EA K    +  GI+A+   +AA +       A+ QH A    +R 
Sbjct: 287 D-GAGVLTALLTQKDEARKFSD-KLAGIEAV---RAAQELALRTLEALRQHRAWLHHQRL 341

Query: 346 EEEKRR--------RAEMGFDDMLIRLNAALQADGGERLASVVREQFPV----ALIDEFQ 393
               R         + E G+ DM     AA +  G   L+  ++++        LIDEFQ
Sbjct: 342 SRLARVLLTCFAAFKRERGWVDMNDVEGAARRLLGDAELSGWLQQRLDARVRHVLIDEFQ 401

Query: 394 DTDPVQYSIFDSIYRIEENHLDSG------LFLIGDPKQAIYAFRGADIYTYLRAR---- 443
           DT+P+Q+    ++Y     +  +G      +FL+GDPKQ+IY FR A+   +  A+    
Sbjct: 402 DTNPLQWQ---ALYGWLSAYAGAGPGEAPCVFLVGDPKQSIYRFRRAEPQVFKAAQAFVV 458

Query: 444 QSTTGRHHTLGTNFRSSHAMVEAVN 468
           Q   G   +     R + A+V+A+N
Sbjct: 459 QGLAGALLSCDHTRRCAPAVVDALN 483