Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 294 a.a., putative Transcriptional regulator AmpR from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 7e-32
 Identities = 89/296 (30%), Positives = 138/296 (46%), Gaps = 12/296 (4%)

Query: 6   PPTPMLQAFVSAAQAGSFARAASDLNLTASAISHQIAGLEEWWGVQLFERHSRGVKLTPA 65
           PP   L+AF  +A+  +F  AA +L+LT  A+S QI  LE   GV LF+R  RG+ LT  
Sbjct: 7   PPLNWLRAFEVSARYLNFTHAAEELHLTQGAVSQQIRHLESQLGVALFKRLPRGLGLTEE 66

Query: 66  GQALLPVT-DGFFKALDGVLQSLNPGKSRPLYLSCTSSLCSTWLIPRM---HGSHTEASF 121
           GQ+ LPV  D   +   G  +     + RPL +  + S    WL PR+     SH +   
Sbjct: 67  GQSYLPVVQDAISRLAVGTNEIFGQRQRRPLKVRGSLSFLHFWLAPRLADFRRSHPQVDI 126

Query: 122 NLDLVLTSADMNSTSLEAHQYDVAVVMGYGDYPDHHVELLMCDAVFPVCSPEFLRLKGDI 181
                L   ++++      + D+ +  G G +     + L  D + PVC+P  L      
Sbjct: 127 RYISNLWVKELDA------EDDLEIRWGSGQWAGVEAQRLTRDMLVPVCAPALLAGCPLR 180

Query: 182 SLEDVARYPLIHRVDDQVCPGWESWFAFQGLAAPPYHHGPRFPDSSLAISLAVKGTGIAL 241
              D+AR PL+H +  +   GW  W    G        G +F      + +A  G G+AL
Sbjct: 181 EPRDLARVPLLHVLGYE--EGWGYWLERVGADQVDSSSGLQFDTLVSTLRMAELGLGVAL 238

Query: 242 GRTALVYDLLADGALVALKSPVMMSPAAYYIICQNGRQLEPDIARLIEWLKTSANK 297
            R++LV DLL +G LVA  +  + +  +++++   G  L PD      WL   A++
Sbjct: 239 ARSSLVEDLLQEGRLVAPFAQRIEASESFFLVRGLGEALSPDAQAFSHWLVAMAHR 294