Pairwise Alignments

Query, 286 a.a., RpiR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 287 a.a., DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 6e-34
 Identities = 87/277 (31%), Positives = 144/277 (51%), Gaps = 3/277 (1%)

Query: 2   DILYQIRARQDAFSAGEGRIAKLMLNDVGFAASASLEELSQRAEVSTATLSRFARSVGCR 61
           ++L QI+ R D  +  E ++A+++L +   A   S+  L+Q A+VS  T++RF RS G  
Sbjct: 3   NLLEQIQGRLDELNKAERKVAEVILLNPQQATRFSIAALAQAAKVSEPTVNRFCRSFGVS 62

Query: 62  DLRDLRLQLAQASGVGSRFLDPA--GLPEQSAFHRQILGDIEATLRQHLSGFNQASFVDA 119
              +L+LQLAQ+   G+ ++  A     + +A+ ++I     A+L       +      A
Sbjct: 63  GYPELKLQLAQSLASGAAYVSRAVEADDDPAAYTQKIFASAIASLDSACQQLDPQQVSRA 122

Query: 120 VSLLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYPIAACHDPVMMRVTAATLGPEHALI 179
           V ++ +AR IH FG+G  + +  D  Q +  R    ++A  D +M R+ A+        +
Sbjct: 123 VDMMIQARQIHFFGLGASAPVALDA-QHKFFRFNLAVSAHADVLMQRMLASVAHTGDLFV 181

Query: 180 VCSLTGLTPELLDVVTLARNYDARIVAITLADSPLAQLADVLLPLQPAETSFIYKPTAAR 239
           + S TG T EL++V  LAR   A ++ +T A SPLA    + L +   E + IY P  +R
Sbjct: 182 IISYTGRTRELVEVARLARENGASVLGLTAAGSPLANACSLSLHIPLPEDTDIYMPMTSR 241

Query: 240 YGLLLAIDLLATELALALPDDNQERLRRIKLALDDYR 276
              L  +D+LAT + L    D Q  LR+IK +L+  R
Sbjct: 242 IIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASR 278