Pairwise Alignments

Query, 286 a.a., RpiR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., transcriptional repressor of rpiB expression (VIMSS) from Escherichia coli BW25113

 Score = 76.3 bits (186), Expect = 8e-19
 Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 7   IRARQDAFSAGEGRIAKLMLNDVGFAASASLEELSQRAEVSTATLSRFARSVGCRDLRDL 66
           +R +Q+  +  E RI + +L     + + +++++++   VS A + + ++ +G    R+L
Sbjct: 20  LRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNL 79

Query: 67  RLQLAQASGVGSRFLDPAGLPEQSAFHRQILGDIEATLRQHLSG---FNQASFVDAVSLL 123
           R  L        + L P+ L    A    +      TLR  + G    N      A    
Sbjct: 80  RSALEDYFSQSEQVL-PSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFF 138

Query: 124 GKARMIHAFGMGGPSSLCSDELQVRLVRLGYPIAACHDPVMMRVTAATLGPEHALIVCSL 183
            +AR    +G GG +++C+D +Q + +R+G    A  D  +M ++A+ L     ++V + 
Sbjct: 139 YQARQRDLYGAGGSNAICAD-VQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTH 197

Query: 184 TGLTPELLDVVTLARNYDARIVAITLA-DSPLAQLADVLLPLQPAETSFIYKPTAARYGL 242
           +G T ++   V LA+   A+I+ IT +  SP+A+LAD ++     ET  + +  +AR   
Sbjct: 198 SGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQ 257

Query: 243 LLAIDLLATELA 254
           L  +D     +A
Sbjct: 258 LTLLDAFFVSVA 269