Pairwise Alignments

Query, 286 a.a., RpiR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 283 a.a., putative HTH-type transcriptional regulator YbbH from Alteromonas macleodii MIT1002

 Score =  124 bits (312), Expect = 2e-33
 Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 10/281 (3%)

Query: 1   MDILYQIRARQDAFSAGEGRIAKLMLNDVGFAASASLEELSQRAEVSTATLSRFARSVGC 60
           M+IL +I   Q AFS  E ++A+++L +   A  +S+  L++ ++VS  T++RF R +  
Sbjct: 1   MNILEKITQNQAAFSKSEKKVAEVILANPQTAIHSSIATLAKMSDVSEPTVNRFCRRLDT 60

Query: 61  RDLRDLRLQLAQASGVGS----RFLDPAGLPEQSAFHRQILGDIEATLRQHLSGFNQASF 116
           +   D +L LAQ+   G+    R +D    P++  +  +I     A+L       +    
Sbjct: 61  KGFPDFKLHLAQSLANGTPYVNRHVDENDSPDE--YTNKIFESTMASLEVARQSVDVNVV 118

Query: 117 VDAVSLLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYPIAACHDPVMMRVTAATLGPEH 176
              V LL +A+ I  FG+G  +S+  D L  +  R   P+    D +M R++        
Sbjct: 119 NRVVDLLTQAQKISFFGLGASASVAHDALN-KFFRFNVPVVYFEDILMQRMSCMNCSDGD 177

Query: 177 ALIVCSLTGLTPELLDVVTLARNYDARIVAITLADSPLAQLADVLLPLQPAETSFIYKPT 236
            +++ S TG T  L+++  +AR  DA +V IT ADSPLAQ    +L L+  E + +Y P 
Sbjct: 178 VVVLISHTGRTKSLVEIAQIARMNDATVVGITSADSPLAQECSYVLSLEVPEDTDMYMPM 237

Query: 237 AARYGLLLAIDLLATELALALPDDNQERLRRIKLALDDYRG 277
           A+R   L  ID+LAT   L   +  +E L+R+K   D  RG
Sbjct: 238 ASRIAQLTLIDVLATGFTLRRGNKFRENLKRVK---DTLRG 275